Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F31E3.2 | exc-7 | F31E3.2a.1 | F35H8.5.1 | Putative serine/threonine-protein kinase F31E3.2. | Uncharacterized protein. | 0.837 |
| H28G03.1 | exc-7 | H28G03.1a.1 | F35H8.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.738 |
| exc-7 | F31E3.2 | F35H8.5.1 | F31E3.2a.1 | Uncharacterized protein. | Putative serine/threonine-protein kinase F31E3.2. | 0.837 |
| exc-7 | H28G03.1 | F35H8.5.1 | H28G03.1a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.738 |
| exc-7 | fox-1 | F35H8.5.1 | T07D1.4d.1 | Uncharacterized protein. | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | 0.840 |
| exc-7 | hrpf-1 | F35H8.5.1 | W02D3.11a.1 | Uncharacterized protein. | HnRNP F homolog. | 0.801 |
| exc-7 | mbl-1 | F35H8.5.1 | K02H8.1a.1 | Uncharacterized protein. | Muscleblind-like protein; Binds to RNA with repeat sequences 5'-CUG-3' and 5'-CCUG-3'. | 0.748 |
| exc-7 | mec-8 | F35H8.5.1 | F46A9.6.3 | Uncharacterized protein. | Mec-8 protein. | 0.812 |
| exc-7 | rsp-8 | F35H8.5.1 | C18D11.4a.2 | Uncharacterized protein. | RRM domain-containing protein. | 0.794 |
| exc-7 | sup-12 | F35H8.5.1 | T22B2.4a.1 | Uncharacterized protein. | RRM domain-containing protein. | 0.875 |
| exc-7 | sym-2 | F35H8.5.1 | ZK1067.6a.1 | Uncharacterized protein. | RNA-binding protein sym-2; mRNA splicing factor that regulates alternative splicing of many genes in embryo. Probably plays a role in the formation of embryo- specific isoforms; Belongs to the ESRP family. | 0.818 |
| exc-7 | unc-16 | F35H8.5.1 | ZK1098.10e.1 | Uncharacterized protein. | JNK-interacting protein; The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of synaptic vesicle transport, through interactions with the JNK-signaling components and motor proteins. Binds specific components of the JNK signaling pathway namely jnk-1, jkk-1 and sek-1. Associates with components of the motor protein, kinesin-1. Pre-assembled unc-16 scaffolding complexes are then transported as a cargo of kinesin, to the [...] | 0.813 |
| fox-1 | exc-7 | T07D1.4d.1 | F35H8.5.1 | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | Uncharacterized protein. | 0.840 |
| fox-1 | hrpf-1 | T07D1.4d.1 | W02D3.11a.1 | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | HnRNP F homolog. | 0.427 |
| fox-1 | mbl-1 | T07D1.4d.1 | K02H8.1a.1 | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | Muscleblind-like protein; Binds to RNA with repeat sequences 5'-CUG-3' and 5'-CCUG-3'. | 0.438 |
| fox-1 | mec-8 | T07D1.4d.1 | F46A9.6.3 | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | Mec-8 protein. | 0.823 |
| fox-1 | rsp-8 | T07D1.4d.1 | C18D11.4a.2 | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | RRM domain-containing protein. | 0.664 |
| fox-1 | sup-12 | T07D1.4d.1 | T22B2.4a.1 | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | RRM domain-containing protein. | 0.663 |
| fox-1 | sym-2 | T07D1.4d.1 | ZK1067.6a.1 | Sex determination protein fox-1; A member of the sex determination pathway involved in making the distinction between one and two X-chromosomes. RNA-binding protein that regulates alternative splicing events by binding to 5'-UGCAUG-3' elements. Regulates alternative splicing of tissue-specific exons. Promotes binding of sup-12 to target RNA. | RNA-binding protein sym-2; mRNA splicing factor that regulates alternative splicing of many genes in embryo. Probably plays a role in the formation of embryo- specific isoforms; Belongs to the ESRP family. | 0.570 |
| hrpf-1 | exc-7 | W02D3.11a.1 | F35H8.5.1 | HnRNP F homolog. | Uncharacterized protein. | 0.801 |
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