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rps-15 protein (Caenorhabditis elegans) - STRING interaction network
"rps-15" - 40S ribosomal protein S15 in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps-1540S ribosomal protein S15 ; Negatively regulates lifespan (151 aa)    
Predicted Functional Partners:
rps-9
40S ribosomal protein S9 (189 aa)
   
  0.999
rps-16
40S ribosomal protein S16 (144 aa)
   
  0.999
rps-14
40S ribosomal protein S14 (152 aa)
   
  0.999
rps-5
40S ribosomal protein S5 (210 aa)
   
  0.999
rps-0
40S ribosomal protein SA ; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (276 aa)
   
  0.999
rps-13
40S ribosomal protein S13 (151 aa)
   
  0.999
Y37E3.8
Protein Y37E3.8, isoform a (145 aa)
   
  0.999
rpl-25.2
60S ribosomal protein L23a 2 ; This protein binds to a specific region on the 26S rRNA (146 aa)
   
  0.999
rps-8
40S ribosomal protein S8 (208 aa)
     
  0.999
rps-3
40S ribosomal protein S3 (247 aa)
   
  0.999
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, nematode
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