STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sre-22Serpentine Receptor, class E (Epsilon). (359 aa)    
Predicted Functional Partners:
Y49E10.25
Lipase_3 domain-containing protein.
   
    0.566
F11C1.4
Uncharacterized protein.
   
    0.563
C30E1.4
Uncharacterized protein.
   
    0.561
nhr-54
Nuclear hormone receptor family member nhr-54; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
   
    0.561
str-253
Seven TM Receptor.
   
    0.561
srsx-2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.557
F49C12.1
Uncharacterized protein.
   
    0.555
srsx-21
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.555
srj-21
Serpentine Receptor, class J.
   
    0.554
F58F6.6
Uncharacterized protein.
   
    0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.