STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ztf-28Zinc finger putative Transcription Factor family. (272 aa)    
Predicted Functional Partners:
T28F2.2
Uncharacterized protein.
   
  
 0.894
F46F2.3
Uncharacterized protein.
      
 0.892
F56A4.12
MFS domain-containing protein.
   
  
 0.813
irld-35
Recep_L_domain domain-containing protein.
      
 0.810
C01B4.7
MFS domain-containing protein.
      
 0.808
C01B4.6
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
      
 0.806
abf-1
Antibacterial factor-related peptide 1.
      
 0.699
str-182
Seven TM Receptor.
      
 0.696
gst-24
Glutathione S-Transferase.
      
 0.666
mel-26
Protein maternal effect lethal 26; Probable substrate-specific adapter of an E3 ubiquitin- protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Controls degradation of microtubule severing protein mei-1 after meiosis. Controls degradation of ppfr-1, the regulatory subunit of PP4 complex, after meiosis. In body wall muscles, involved in the organization of myosin thick filaments, likely by regulating the degradation of mei-1 downstream of unc-89. May also activate the TORC1 pathway.
   
   0.535
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.