STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdin-1ANK_REP_REGION domain-containing protein. (1484 aa)    
Predicted Functional Partners:
C02B8.6
Uncharacterized RING finger protein C02B8.6.
    
 
 0.836
B0334.4
PRELI/MSF1 domain-containing protein.
      
 0.810
srv-1
Serpentine receptor class V-1.
      
 0.810
Y48A6B.8
Uncharacterized protein.
      
 0.810
sri-19
Serpentine Receptor, class I.
      
 0.810
ncx-5
Na/Ca eXchangers; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
     
 0.804
gap-3
GTPase Activating Protein family.
   
  0.731
ced-2
Cell death abnormality protein 2; Required for cell migration and engulfment of cell corpses but not for programmed cell death/apoptosis. Has a role in the migration of the 2 gonadal distal tip cells (DTCs).
    
 0.709
best-3
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
      
 0.699
cfp-1
Zf-CpG_bind_C domain-containing protein.
   
 
 0.686
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.