Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C27D8.2 | F15D3.5 | C27D8.2.1 | F15D3.5.1 | BACK domain-containing protein. | Uncharacterized protein. | 0.758 |
C27D8.2 | ctg-2 | C27D8.2.1 | T13H5.2a.1 | BACK domain-containing protein. | CRAL/TRIO and GOLD domain containing. | 0.690 |
C27D8.2 | gst-17 | C27D8.2.1 | F37B1.6.1 | BACK domain-containing protein. | Glutathione S-Transferase. | 0.698 |
C27D8.2 | pqn-24 | C27D8.2.1 | D1007.14.1 | BACK domain-containing protein. | Prion-like-(Q/N-rich)-domain-bearing protein. | 0.691 |
F15D3.5 | C27D8.2 | F15D3.5.1 | C27D8.2.1 | Uncharacterized protein. | BACK domain-containing protein. | 0.758 |
F15D3.5 | ctg-2 | F15D3.5.1 | T13H5.2a.1 | Uncharacterized protein. | CRAL/TRIO and GOLD domain containing. | 0.690 |
F15D3.5 | gst-17 | F15D3.5.1 | F37B1.6.1 | Uncharacterized protein. | Glutathione S-Transferase. | 0.698 |
F15D3.5 | pqn-24 | F15D3.5.1 | D1007.14.1 | Uncharacterized protein. | Prion-like-(Q/N-rich)-domain-bearing protein. | 0.691 |
cnc-9 | col-155 | R13D7.11.1 | F55C10.3.1 | CaeNaCin (Caenorhabditis bacteriocin). | Putative cuticle collagen 155; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.890 |
cnc-9 | col-37 | R13D7.11.1 | ZK863.2.1 | CaeNaCin (Caenorhabditis bacteriocin). | Col_cuticle_N domain-containing protein. | 0.820 |
cnc-9 | col-40 | R13D7.11.1 | T13B5.4.1 | CaeNaCin (Caenorhabditis bacteriocin). | Cuticle collagen 40; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.766 |
cnc-9 | gst-17 | R13D7.11.1 | F37B1.6.1 | CaeNaCin (Caenorhabditis bacteriocin). | Glutathione S-Transferase. | 0.759 |
cnc-9 | gst-44 | R13D7.11.1 | F13A7.10.1 | CaeNaCin (Caenorhabditis bacteriocin). | Glutathione S-Transferase; Belongs to the GST superfamily. | 0.698 |
cnc-9 | gstk-2 | R13D7.11.1 | D2024.7.1 | CaeNaCin (Caenorhabditis bacteriocin). | Glutathione s-transferase kappa 2; Has roles in respiratory and lipid metabolism. | 0.805 |
col-155 | cnc-9 | F55C10.3.1 | R13D7.11.1 | Putative cuticle collagen 155; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | CaeNaCin (Caenorhabditis bacteriocin). | 0.890 |
col-155 | col-37 | F55C10.3.1 | ZK863.2.1 | Putative cuticle collagen 155; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.892 |
col-155 | gst-17 | F55C10.3.1 | F37B1.6.1 | Putative cuticle collagen 155; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Glutathione S-Transferase. | 0.850 |
col-155 | gst-44 | F55C10.3.1 | F13A7.10.1 | Putative cuticle collagen 155; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Glutathione S-Transferase; Belongs to the GST superfamily. | 0.809 |
col-155 | gstk-2 | F55C10.3.1 | D2024.7.1 | Putative cuticle collagen 155; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Glutathione s-transferase kappa 2; Has roles in respiratory and lipid metabolism. | 0.852 |
col-37 | cnc-9 | ZK863.2.1 | R13D7.11.1 | Col_cuticle_N domain-containing protein. | CaeNaCin (Caenorhabditis bacteriocin). | 0.820 |
page 1 of 3