Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ZK180.5 | col-107 | ZK180.5a.1 | C34H4.4.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.589 |
ZK180.5 | col-125 | ZK180.5a.1 | C29F4.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.638 |
ZK180.5 | col-130 | ZK180.5a.1 | F08G5.4.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.591 |
ZK180.5 | ram-2 | ZK180.5a.1 | F38A3.2.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.590 |
adt-1 | lon-8 | C02B4.1.1 | Y59A8B.20.1 | A disintegrin and metalloproteinase with thrombospondin motifs adt-1; Plays a role in ray morphogenesis in the male tail, probably by remodeling the extracellular matrix (ECM) in the cuticle. | Protein lon-8; Secreted protein that is involved in larval elongation, early adult growth and male tail development. | 0.683 |
adt-1 | ram-2 | C02B4.1.1 | F38A3.2.1 | A disintegrin and metalloproteinase with thrombospondin motifs adt-1; Plays a role in ray morphogenesis in the male tail, probably by remodeling the extracellular matrix (ECM) in the cuticle. | Col_cuticle_N domain-containing protein. | 0.595 |
adt-1 | ram-5 | C02B4.1.1 | T24C2.1.1 | A disintegrin and metalloproteinase with thrombospondin motifs adt-1; Plays a role in ray morphogenesis in the male tail, probably by remodeling the extracellular matrix (ECM) in the cuticle. | ZP domain-containing protein. | 0.678 |
col-10 | col-107 | B0222.8.1 | C34H4.4.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.637 |
col-10 | col-125 | B0222.8.1 | C29F4.1.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.638 |
col-10 | col-167 | B0222.8.1 | T10E10.2.2 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.903 |
col-10 | ram-2 | B0222.8.1 | F38A3.2.1 | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Col_cuticle_N domain-containing protein. | 0.592 |
col-107 | ZK180.5 | C34H4.4.1 | ZK180.5a.1 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.589 |
col-107 | col-10 | C34H4.4.1 | B0222.8.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.637 |
col-107 | col-125 | C34H4.4.1 | C29F4.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.615 |
col-107 | col-130 | C34H4.4.1 | F08G5.4.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.618 |
col-107 | col-167 | C34H4.4.1 | T10E10.2.2 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.636 |
col-107 | ram-2 | C34H4.4.1 | F38A3.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.629 |
col-125 | ZK180.5 | C29F4.1.1 | ZK180.5a.1 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.638 |
col-125 | col-10 | C29F4.1.1 | B0222.8.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 10; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.638 |
col-125 | col-107 | C29F4.1.1 | C34H4.4.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.615 |
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