STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnj-11DNaJ domain (Prokaryotic heat shock protein). (589 aa)    
Predicted Functional Partners:
hsp-1
Heat shock 70 kDa protein A.
   
 0.891
hsp-110
Heat shock protein 110.
   
 0.877
F11F1.1
DUF148 domain-containing protein; Belongs to the heat shock protein 70 family.
   
 0.861
F44E5.4
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.861
dnj-19
DNaJ domain (Prokaryotic heat shock protein).
   
 
 0.828
hsp-70
Heat Shock Protein; Belongs to the heat shock protein 70 family.
   
 
 0.809
F44E5.5
annotation not available
   
 
 0.778
F27D4.4
Zinc finger CCCH domain-containing protein 15 homolog; Belongs to the ZC3H15/TMA46 family.
   
   0.768
zgpa-1
Zinc finger G-PAtch domain-containing protein homolog.
   
  
 0.753
rpl-31
60S ribosomal protein L31.
   
 
 0.713
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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