STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srsx-22G_PROTEIN_RECEP_F1_2 domain-containing protein. (306 aa)    
Predicted Functional Partners:
srt-62
Serpentine Receptor, class T.
   
  
 0.875
asic-2
Degenerin-like protein asic-2.
      
 0.809
twk-12
TWiK family of potassium channels protein 12.
      
 0.758
npr-23
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.697
nlp-39
Neuropeptide-Like Protein.
      
 0.695
nlp-36
Neuropeptide-like peptide 36.
      
 0.660
srh-88
Serpentine Receptor, class H.
   
    0.548
egas-1
EGF plus ASC domain ion channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.543
srh-292
Serpentine Receptor, class H.
   
    0.473
srbc-45
Serpentine Receptor, class BC (Class B-like).
   
    0.457
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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