STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hinf-1HIstone Nuclear Factor p (P) homolog. (541 aa)    
Predicted Functional Partners:
ceh-45
Homeobox domain-containing protein.
    
   0.916
mls-2
Homeobox domain-containing protein.
   
   0.769
taf-8
BTP domain-containing protein.
   
    0.575
ZK546.2
Uncharacterized protein.
   
    0.558
dnc-2
Probable dynactin subunit 2; Modulates cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organization during mitosis. May play a role in synapse formation during brain development (By similarity); Belongs to the dynactin subunit 2 family.
      
 0.542
cdl-1
Histone RNA hairpin-binding protein; Involved in histone pre-mRNA 3' processing. Required for chromosome condensation, progression of cell death and morphogenesis.
   
  
 0.536
K07A1.15
Sm domain-containing protein.
      
 0.516
mrps-27
Ig-like domain-containing protein.
 
      0.449
efl-3
E2F-like (Mammalian transcription factor).
   
  
 0.432
vang-1
Vang-like protein.
   
  
 0.419
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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