Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
K07A1.15 | cdl-1 | K07A1.15.1 | R06F6.1.1 | Sm domain-containing protein. | Histone RNA hairpin-binding protein; Involved in histone pre-mRNA 3' processing. Required for chromosome condensation, progression of cell death and morphogenesis. | 0.827 |
K07A1.15 | hinf-1 | K07A1.15.1 | F39B2.1.1 | Sm domain-containing protein. | HIstone Nuclear Factor p (P) homolog. | 0.516 |
ZK546.2 | hinf-1 | ZK546.2a.1 | F39B2.1.1 | Uncharacterized protein. | HIstone Nuclear Factor p (P) homolog. | 0.558 |
cdl-1 | K07A1.15 | R06F6.1.1 | K07A1.15.1 | Histone RNA hairpin-binding protein; Involved in histone pre-mRNA 3' processing. Required for chromosome condensation, progression of cell death and morphogenesis. | Sm domain-containing protein. | 0.827 |
cdl-1 | hinf-1 | R06F6.1.1 | F39B2.1.1 | Histone RNA hairpin-binding protein; Involved in histone pre-mRNA 3' processing. Required for chromosome condensation, progression of cell death and morphogenesis. | HIstone Nuclear Factor p (P) homolog. | 0.536 |
ceh-45 | hinf-1 | ZK993.1a.1 | F39B2.1.1 | Homeobox domain-containing protein. | HIstone Nuclear Factor p (P) homolog. | 0.916 |
dnc-2 | hinf-1 | C28H8.12.1 | F39B2.1.1 | Probable dynactin subunit 2; Modulates cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organization during mitosis. May play a role in synapse formation during brain development (By similarity); Belongs to the dynactin subunit 2 family. | HIstone Nuclear Factor p (P) homolog. | 0.542 |
efl-3 | hinf-1 | F49E12.6.1 | F39B2.1.1 | E2F-like (Mammalian transcription factor). | HIstone Nuclear Factor p (P) homolog. | 0.432 |
hinf-1 | K07A1.15 | F39B2.1.1 | K07A1.15.1 | HIstone Nuclear Factor p (P) homolog. | Sm domain-containing protein. | 0.516 |
hinf-1 | ZK546.2 | F39B2.1.1 | ZK546.2a.1 | HIstone Nuclear Factor p (P) homolog. | Uncharacterized protein. | 0.558 |
hinf-1 | cdl-1 | F39B2.1.1 | R06F6.1.1 | HIstone Nuclear Factor p (P) homolog. | Histone RNA hairpin-binding protein; Involved in histone pre-mRNA 3' processing. Required for chromosome condensation, progression of cell death and morphogenesis. | 0.536 |
hinf-1 | ceh-45 | F39B2.1.1 | ZK993.1a.1 | HIstone Nuclear Factor p (P) homolog. | Homeobox domain-containing protein. | 0.916 |
hinf-1 | dnc-2 | F39B2.1.1 | C28H8.12.1 | HIstone Nuclear Factor p (P) homolog. | Probable dynactin subunit 2; Modulates cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organization during mitosis. May play a role in synapse formation during brain development (By similarity); Belongs to the dynactin subunit 2 family. | 0.542 |
hinf-1 | efl-3 | F39B2.1.1 | F49E12.6.1 | HIstone Nuclear Factor p (P) homolog. | E2F-like (Mammalian transcription factor). | 0.432 |
hinf-1 | mls-2 | F39B2.1.1 | C39E6.4.1 | HIstone Nuclear Factor p (P) homolog. | Homeobox domain-containing protein. | 0.769 |
hinf-1 | mrps-27 | F39B2.1.1 | K11B4.1.1 | HIstone Nuclear Factor p (P) homolog. | Ig-like domain-containing protein. | 0.449 |
hinf-1 | taf-8 | F39B2.1.1 | ZK1320.12b.1 | HIstone Nuclear Factor p (P) homolog. | BTP domain-containing protein. | 0.575 |
hinf-1 | vang-1 | F39B2.1.1 | B0410.2a.1 | HIstone Nuclear Factor p (P) homolog. | Vang-like protein. | 0.419 |
mls-2 | hinf-1 | C39E6.4.1 | F39B2.1.1 | Homeobox domain-containing protein. | HIstone Nuclear Factor p (P) homolog. | 0.769 |
mrps-27 | hinf-1 | K11B4.1.1 | F39B2.1.1 | Ig-like domain-containing protein. | HIstone Nuclear Factor p (P) homolog. | 0.449 |
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