STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psa-3Meis_PKNOX_N domain-containing protein. (275 aa)    
Predicted Functional Partners:
ceh-20
Homeobox protein ceh-20; Transcription factor that binds to the 5'-TGATNNAT(G/T)(G/A)- 3' PBC/Hox lineage enhancer region of sem-2 to promote cell fate specification in the postembryonic mesoderm (also known as the M lineage). Has a role in the mig-13 pathway to promote the guidance, migration and positioning of Q neuroblasts and their descendants along the anteroposterior body axis and the anterior migration of BDU interneurons. Also required for normal vulval formation.
   
 
 0.898
nob-1
Homeobox domain-containing protein.
   
 
 0.848
ceh-10
Homeobox protein ceh-10; Required for larval development and for cell fate specification and migration of CAN neurons.
   
 
 0.838
ceh-22
Homeobox protein ceh-22; Involved in combinatorial activation of gene expression in pharyngeal muscle. Specifically binds a site necessary for activity of the B subelement of myo-2 enhancer.
      
 0.820
pqn-36
Prion-like-(Q/N-rich)-domain-bearing protein.
   
 
 0.816
Y66D12A.9
Uncharacterized protein.
   
  
 0.763
ceh-40
Homeobox protein ceh-40; Belongs to the TALE/PBX homeobox family.
    
 
 0.750
npax-2
Paired domain-containing protein.
   
 
 0.741
egl-18
GATA-type domain-containing protein.
      
 0.692
ocam-1
ONECUT (Homeobox) Associated Motif containing.
      
 0.667
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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