STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F39E9.6Uncharacterized protein. (70 aa)    
Predicted Functional Partners:
C49G7.10
Uncharacterized protein.
      
 0.971
phat-3
PHAryngeal gland Toxin-related.
      
 0.896
set-33
SET (Trithorax/polycomb) domain containing.
      
 0.698
F58D12.3
Uncharacterized protein.
   
    0.591
srw-119
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.588
cfi-1
AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression.
   
    0.581
Y40B1A.2
WW domain-containing protein.
   
    0.576
T27E7.4
Uncharacterized protein.
   
    0.572
str-9
Seven TM Receptor.
   
    0.570
F54F2.6
Uncharacterized protein F54F2.6.
   
    0.565
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.