Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Y41D4B.26 | dpy-14 | Y41D4B.26.1 | H27M09.4.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.537 |
Y41D4B.26 | hch-1 | Y41D4B.26.1 | F40E10.1.1 | Uncharacterized protein. | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | 0.592 |
Y45F10C.2 | Y45F10C.4 | Y45F10C.2.1 | Y45F10C.4.1 | UPF0375 protein Y45F10C.2; Negatively regulates the egg-laying rate by promoting retention of fertilized eggs. | UPF0375 protein Y45F10C.4. | 0.976 |
Y45F10C.2 | hch-1 | Y45F10C.2.1 | F40E10.1.1 | UPF0375 protein Y45F10C.2; Negatively regulates the egg-laying rate by promoting retention of fertilized eggs. | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | 0.851 |
Y45F10C.4 | Y45F10C.2 | Y45F10C.4.1 | Y45F10C.2.1 | UPF0375 protein Y45F10C.4. | UPF0375 protein Y45F10C.2; Negatively regulates the egg-laying rate by promoting retention of fertilized eggs. | 0.976 |
Y45F10C.4 | hch-1 | Y45F10C.4.1 | F40E10.1.1 | UPF0375 protein Y45F10C.4. | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | 0.912 |
col-121 | dpy-14 | F56D5.1.1 | H27M09.4.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.636 |
col-121 | hch-1 | F56D5.1.1 | F40E10.1.1 | Col_cuticle_N domain-containing protein. | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | 0.629 |
dpy-14 | Y41D4B.26 | H27M09.4.1 | Y41D4B.26.1 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.537 |
dpy-14 | col-121 | H27M09.4.1 | F56D5.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.636 |
dpy-14 | hch-1 | H27M09.4.1 | F40E10.1.1 | Col_cuticle_N domain-containing protein. | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | 0.622 |
hch-1 | Y41D4B.26 | F40E10.1.1 | Y41D4B.26.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | Uncharacterized protein. | 0.592 |
hch-1 | Y45F10C.2 | F40E10.1.1 | Y45F10C.2.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | UPF0375 protein Y45F10C.2; Negatively regulates the egg-laying rate by promoting retention of fertilized eggs. | 0.851 |
hch-1 | Y45F10C.4 | F40E10.1.1 | Y45F10C.4.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | UPF0375 protein Y45F10C.4. | 0.912 |
hch-1 | col-121 | F40E10.1.1 | F56D5.1.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | Col_cuticle_N domain-containing protein. | 0.629 |
hch-1 | dpy-14 | F40E10.1.1 | H27M09.4.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | Col_cuticle_N domain-containing protein. | 0.622 |
hch-1 | nas-2 | F40E10.1.1 | F56A4.1.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | Zinc metalloproteinase nas-2; Metalloprotease. | 0.588 |
hch-1 | nas-3 | F40E10.1.1 | K06A4.1.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | Zinc metalloproteinase nas-3; Metalloprotease. | 0.595 |
hch-1 | noah-2 | F40E10.1.1 | F52B11.3.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). | 0.603 |
hch-1 | sym-1 | F40E10.1.1 | C44H4.3.1 | Zinc metalloproteinase nas-34; Metalloprotease (By similarity). Required for normal hatching and migration of neuroblasts. May act by degrading eggshell proteins at hatching. | SYM-1 protein. | 0.563 |
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