STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F40F12.3Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
ZK632.9
Uncharacterized protein ZK632.9.
      
 0.941
R10E11.5
Uncharacterized protein R10E11.5.
   
  
 0.811
srxa-10
Serpentine receptor class XA 10.
      
 0.805
T05G5.4
Uncharacterized protein T05G5.4.
      
 0.805
ech-6
Probable enoyl-CoA hydratase, mitochondrial.
      
 0.801
vps-53
Vacuolar protein sorting-associated protein 53 homolog; Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi. Plays a role in the trafficking of cargo to dense-core vesicles, probably through association with the EARP-interacting protein eipr-1. Important for neuronal function.
      
 0.698
T05G5.1
Uncharacterized protein T05G5.1.
      
 0.660
acs-18
AMP-binding domain-containing protein.
   
    0.549
C09H5.7
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
    0.538
C10G11.8
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
    0.538
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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