STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lbp-1Fatty acid-binding protein homolog 1; May play a role in sequestering potentially toxic fatty acids and their peroxidation products, or it may be involved in the maintenance of the impermeable lipid layer of the eggshell. Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (159 aa)    
Predicted Functional Partners:
EEED8.3
Uncharacterized protein EEED8.3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.704
acbp-7
ACB domain-containing protein.
      
 0.696
Y75B8A.28
Uncharacterized protein.
      
 0.549
spp-20
Saposin B-type domain-containing protein.
   
  
 0.534
acox-3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.480
maa-1
ACB domain-containing protein.
   
  
 0.475
T04F8.8
Uncharacterized protein.
   
  
 0.471
fipr-2
FIP (Fungus-Induced Protein) Related.
      
 0.465
F56C9.8
Uncharacterized protein.
      
 0.465
T21H3.1
Lipase_3 domain-containing protein.
      
 0.465
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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