STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lbp-3Fatty acid-binding protein homolog 3; May play a role in sequestering potentially toxic fatty acids and their peroxidation products, or it may be involved in the maintenance of the impermeable lipid layer of the eggshell. Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (165 aa)    
Predicted Functional Partners:
lbp-7
Fatty acid-binding protein homolog 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.707
ZK228.3
Acetyltransf_18 domain-containing protein.
   
  
 0.701
anat-1
AANAT (Arylalkylamine N-AcetylTransferase) homolog.
      
 0.700
ZK829.7
PKS_ER domain-containing protein.
      
 0.700
nlp-11
Neuropeptide-like peptide 11.
      
 0.696
moc-2
MoCF_biosynth domain-containing protein.
      
 0.692
F32D1.5
GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
      
 0.668
pes-9
M20_dimer domain-containing protein.
      
 0.661
F20D6.11
Rieske domain-containing protein.
      
 0.660
lbp-8
FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.645
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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