STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xbx-6X-BoX promoter element regulated; Belongs to the BI1 family. (296 aa)    
Predicted Functional Partners:
imp-1
IntraMembrane Protease (IMPAS) family.
   
  
 0.814
ZK858.6
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
  
 0.811
tag-123
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.808
Y17G7B.18
Probable RNA methyltransferase Y17G7B.18; Probable RNA methyltransferase; Belongs to the methyltransferase superfamily.
      
 0.807
Y106G6H.6
Uncharacterized protein.
   
  
 0.804
Y17G7B.20
Uncharacterized protein.
   
  
 0.804
tag-175
Transmembrane protein 41 homolog.
     
 0.803
F25B5.3
Putative cytosolic 5'-nucleotidase 3.
   
  
 0.762
Y48C3A.18
YrdC-like domain-containing protein.
     
 0.761
tag-189
Post-GPI attachment to proteins factor 2; Involved in the lipid remodeling steps of GPI-anchor maturation. Required for stable expression of GPI-anchored proteins at the cell surface (By similarity); Belongs to the PGAP2 family.
   
  
 0.712
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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