STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx-11Putative T-box protein 11. (322 aa)    
Predicted Functional Partners:
ceh-27
Homeobox domain-containing protein.
    
 
 0.844
sdz-23
EGF-like domain-containing protein.
   
  
 0.814
ztf-17
Zinc finger transcription factor family protein 17.
    
 
 0.727
B0238.11
Uncharacterized protein.
   
 
 0.717
sdz-31
SKN-1 Dependent Zygotic transcript.
   
  
 0.716
kin-33
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.701
sdz-19
SKN-1 Dependent Zygotic transcript.
   
  
 0.696
gad-2
Uncharacterized protein.
      
 0.693
elt-6
GATA-like transcription factor ELT-6.
   
 
 0.676
nhr-43
Nuclear Hormone Receptor family.
      
 0.612
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.