Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
col-118 | col-139 | T11B7.3a.1 | F41F3.4.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.739 |
col-129 | col-139 | M18.1a.1 | F41F3.4.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.949 |
col-129 | col-140 | M18.1a.1 | F26F12.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.568 |
col-129 | col-184 | M18.1a.1 | F15A2.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.537 |
col-129 | col-8 | M18.1a.1 | F11H8.3.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.400 |
col-129 | col-81 | M18.1a.1 | F38A3.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-129 | perm-4 | M18.1a.1 | C44B12.5.1 | Col_cuticle_N domain-containing protein. | PERMeable eggshell. | 0.734 |
col-139 | col-118 | F41F3.4.1 | T11B7.3a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.739 |
col-139 | col-129 | F41F3.4.1 | M18.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.949 |
col-139 | col-140 | F41F3.4.1 | F26F12.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.855 |
col-139 | col-153 | F41F3.4.1 | F17C11.3.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.695 |
col-139 | col-184 | F41F3.4.1 | F15A2.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.819 |
col-139 | col-61 | F41F3.4.1 | C01H6.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.699 |
col-139 | col-8 | F41F3.4.1 | F11H8.3.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.697 |
col-139 | col-80 | F41F3.4.1 | C09G5.5.1 | Col_cuticle_N domain-containing protein. | Putative cuticle collagen 80; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.828 |
col-139 | col-81 | F41F3.4.1 | F38A3.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-139 | perm-4 | F41F3.4.1 | C44B12.5.1 | Col_cuticle_N domain-containing protein. | PERMeable eggshell. | 0.708 |
col-140 | col-129 | F26F12.1.1 | M18.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.568 |
col-140 | col-139 | F26F12.1.1 | F41F3.4.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.855 |
col-140 | col-184 | F26F12.1.1 | F15A2.1a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
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