STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F41G3.20Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
mrps-18.C
Mitochondrial Ribosomal Protein, Small.
      
 0.911
aipr-1
Aryl hydrocarbon receptor Interacting Protein (AIP) Related.
      
 0.805
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.804
tofu-6
Embryonic developmental protein tofu-6; Required maternally for early embryonic cell divisions. May have a role in DNA replication.
      
 0.741
F59C6.8
Glycosyltransferase family 92 protein F59C6.8.
      
 0.699
B0205.1
Uncharacterized protein.
      
 0.695
cyn-4
Peptidyl-prolyl cis-trans isomerase 4; May catalyze the cis-trans isomerization of proline imidic peptide bonds in oligopeptides thereby assisting the folding of proteins. May also function as a chaperone, playing a role in intracellular transport of proteins. May also have a protein ubiquitin ligase activity acting as an E3 ubiquitin protein ligase or as a ubiquitin-ubiquitin ligase promoting elongation of ubiquitin chains on proteins. Influences the hermaphrodite switch from spermatogenesis to oogenesis. Required for body wall muscle cell development.
      
 0.660
nas-32
Zinc metalloproteinase nas-32; Metalloprotease.
      
 0.660
M04F3.2
Uncharacterized protein.
      
 0.622
F55H12.4
Uncharacterized protein.
      
 0.575
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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