STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttyh-1Protein tweety homolog 1; Probable chloride channel. (519 aa)    
Predicted Functional Partners:
C11H1.2
Uncharacterized protein.
   
  
 0.877
Y75B8A.16
Uncharacterized protein.
      
 0.875
aqp-6
AQuaPorin or aquaglyceroporin related; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.813
best-15
Bestrophin homolog 15; Forms chloride channels.
      
 0.812
chil-1
Glyco_18 domain-containing protein.
      
 0.808
scl-26
SCP domain-containing protein.
      
 0.699
hpo-10
Uncharacterized protein.
   
  
 0.552
aqp-11
Aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.549
C34D10.2
Uncharacterized protein.
   
  
 0.546
best-14
Bestrophin homolog 14.
   
  
 0.540
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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