STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxa-183F-box domain-containing protein. (365 aa)    
Predicted Functional Partners:
C03G6.5
UPF0376 protein C03G6.5.
      
 0.850
K11D12.9
RING-type domain-containing protein.
      
 0.850
egal-1
Egalitarian protein homolog; Part of a complex with bicd-1 and dlc-1, which is recruited to the nuclear envelope by unc-83, where in turn, it recruits dynein to the nuclear surface and regulates nuclear migration in hypodermal precursor cells.
      
 0.809
best-3
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
      
 0.807
T08H10.1
Aldo_ket_red domain-containing protein.
   
  
 0.758
mxt-1
Eukaryotic translation initiation factor 4E-binding protein Mextli homolog; Plays a role in promoting translation.
      
 0.758
mop-25.2
MO25-like protein 2; Regulates asymmetric cell division in Q.p neuroblast lineage. Plays a role in cell shedding during embryogenesis.
      
 0.698
gst-28
Glutathione S-Transferase; Belongs to the GST superfamily.
   
  
 0.669
C09F12.3
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.660
H09G03.1
Uncharacterized protein.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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