Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F57A8.4 | shk-1 | F57A8.4.1 | ZK1321.2c.1 | G_PROTEIN_RECEP_F1_2 domain-containing protein. | Potassium voltage-gated channel protein shk-1; Mediates the voltage-dependent potassium ion permeability of excitable membranes. Has an important role in repolarization and in regulating the pattern of action potential firing. Isoform a expresses currents in a more depolarized voltage range than isoform d. | 0.855 |
F57A8.4 | sra-12 | F57A8.4.1 | F44F4.7.1 | G_PROTEIN_RECEP_F1_2 domain-containing protein. | Serpentine receptor class alpha-12; Belongs to the nematode receptor-like protein sra family. | 0.700 |
lgc-54 | sra-12 | T15B7.16.1 | F44F4.7.1 | Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Serpentine receptor class alpha-12; Belongs to the nematode receptor-like protein sra family. | 0.660 |
shk-1 | F57A8.4 | ZK1321.2c.1 | F57A8.4.1 | Potassium voltage-gated channel protein shk-1; Mediates the voltage-dependent potassium ion permeability of excitable membranes. Has an important role in repolarization and in regulating the pattern of action potential firing. Isoform a expresses currents in a more depolarized voltage range than isoform d. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.855 |
shk-1 | sra-12 | ZK1321.2c.1 | F44F4.7.1 | Potassium voltage-gated channel protein shk-1; Mediates the voltage-dependent potassium ion permeability of excitable membranes. Has an important role in repolarization and in regulating the pattern of action potential firing. Isoform a expresses currents in a more depolarized voltage range than isoform d. | Serpentine receptor class alpha-12; Belongs to the nematode receptor-like protein sra family. | 0.465 |
sra-12 | F57A8.4 | F44F4.7.1 | F57A8.4.1 | Serpentine receptor class alpha-12; Belongs to the nematode receptor-like protein sra family. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.700 |
sra-12 | lgc-54 | F44F4.7.1 | T15B7.16.1 | Serpentine receptor class alpha-12; Belongs to the nematode receptor-like protein sra family. | Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.660 |
sra-12 | shk-1 | F44F4.7.1 | ZK1321.2c.1 | Serpentine receptor class alpha-12; Belongs to the nematode receptor-like protein sra family. | Potassium voltage-gated channel protein shk-1; Mediates the voltage-dependent potassium ion permeability of excitable membranes. Has an important role in repolarization and in regulating the pattern of action potential firing. Isoform a expresses currents in a more depolarized voltage range than isoform d. | 0.465 |