Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
abts-1 | crp-1 | F52B5.1c.1 | Y32F6B.3.1 | Anion exchange protein. | Cdc-42 Related Protein. | 0.507 |
abts-1 | dyla-1 | F52B5.1c.1 | F41G4.1.1 | Anion exchange protein. | DYnein Light chain, Axonemal p28 type. | 0.532 |
abts-1 | eor-1 | F52B5.1c.1 | R11E3.6a.1 | Anion exchange protein. | EOR-1. | 0.666 |
abts-1 | eor-2 | F52B5.1c.1 | C44H4.7a.2 | Anion exchange protein. | EOR-2A. | 0.533 |
abts-1 | kcc-2 | F52B5.1c.1 | H16O14.1d.1 | Anion exchange protein. | K+/Cl-Cotransporter. | 0.905 |
abts-1 | let-99 | F52B5.1c.1 | K08E7.3.1 | Anion exchange protein. | Protein let-99; Required for the proper orientation of spindles after the establishment of polarity. May play a role in interactions between the astral microtubules and the cortical cytoskeleton. Required for asymmetric forces on nuclei and spindles. Acts downstream of the PAR signaling as an intermediate that transduces polarity information to the machinery that positions the mitotic spindle, possibly by regulating force generation. Regulates gpr-1/2 asymmetric cortical localization during the first embryonic cell divisions. Acts antagonistically to the gpr-1/2 signaling pathway. Regu [...] | 0.468 |
abts-1 | mig-2 | F52B5.1c.1 | C35C5.4a.1 | Anion exchange protein. | Rac-like GTPase. | 0.507 |
abts-1 | nkcc-1 | F52B5.1c.1 | Y37A1C.1g.1 | Anion exchange protein. | Na-K-Cl Cotransporter homolog. | 0.757 |
abts-1 | ostd-1 | F52B5.1c.1 | M01A10.3.2 | Anion exchange protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.665 |
abts-1 | rho-1 | F52B5.1c.1 | Y51H4A.3a.1 | Anion exchange protein. | Ras-like GTP-binding protein rhoA; Required for ventral migration of epidermal cells during ventral enclosure in the embryo and for cell elongation. Also required for ventral migration of P cells during larval development. Involved in asymmetric spindle positioning during anaphase and establishment of cell polarity during embryo development. In adults, involved in regulation of multiple processes including locomotion, pharyngeal pumping, fecundity, ovulation, defecation and body morphology. In body wall muscles, regulates organization of myosin thick filaments downstream of unc-89. Ass [...] | 0.510 |
crp-1 | abts-1 | Y32F6B.3.1 | F52B5.1c.1 | Cdc-42 Related Protein. | Anion exchange protein. | 0.507 |
crp-1 | let-99 | Y32F6B.3.1 | K08E7.3.1 | Cdc-42 Related Protein. | Protein let-99; Required for the proper orientation of spindles after the establishment of polarity. May play a role in interactions between the astral microtubules and the cortical cytoskeleton. Required for asymmetric forces on nuclei and spindles. Acts downstream of the PAR signaling as an intermediate that transduces polarity information to the machinery that positions the mitotic spindle, possibly by regulating force generation. Regulates gpr-1/2 asymmetric cortical localization during the first embryonic cell divisions. Acts antagonistically to the gpr-1/2 signaling pathway. Regu [...] | 0.499 |
dyla-1 | abts-1 | F41G4.1.1 | F52B5.1c.1 | DYnein Light chain, Axonemal p28 type. | Anion exchange protein. | 0.532 |
eor-1 | abts-1 | R11E3.6a.1 | F52B5.1c.1 | EOR-1. | Anion exchange protein. | 0.666 |
eor-1 | eor-2 | R11E3.6a.1 | C44H4.7a.2 | EOR-1. | EOR-2A. | 0.942 |
eor-2 | abts-1 | C44H4.7a.2 | F52B5.1c.1 | EOR-2A. | Anion exchange protein. | 0.533 |
eor-2 | eor-1 | C44H4.7a.2 | R11E3.6a.1 | EOR-2A. | EOR-1. | 0.942 |
kcc-2 | abts-1 | H16O14.1d.1 | F52B5.1c.1 | K+/Cl-Cotransporter. | Anion exchange protein. | 0.905 |
kcc-2 | nkcc-1 | H16O14.1d.1 | Y37A1C.1g.1 | K+/Cl-Cotransporter. | Na-K-Cl Cotransporter homolog. | 0.525 |
let-99 | abts-1 | K08E7.3.1 | F52B5.1c.1 | Protein let-99; Required for the proper orientation of spindles after the establishment of polarity. May play a role in interactions between the astral microtubules and the cortical cytoskeleton. Required for asymmetric forces on nuclei and spindles. Acts downstream of the PAR signaling as an intermediate that transduces polarity information to the machinery that positions the mitotic spindle, possibly by regulating force generation. Regulates gpr-1/2 asymmetric cortical localization during the first embryonic cell divisions. Acts antagonistically to the gpr-1/2 signaling pathway. Regu [...] | Anion exchange protein. | 0.468 |
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