STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc-36Tetratricopeptide repeat protein 36; Belongs to the TTC36 family. (179 aa)    
Predicted Functional Partners:
K07B1.4
Uncharacterized protein.
   
  
 0.863
rpap-3
RPAP3_C domain-containing protein.
      
 0.760
ttc-1
TPR_REGION domain-containing protein.
      
 0.741
fah-1
Fumarylacetoacetase.
   
  
 0.711
pssy-1
PhosphatidylSerine SYnthase.
      
 0.700
sma-10
Leucine-rich repeats and immunoglobulin-like domains protein sma-10; Binds to the TGF-beta receptors sma-6 and daf-4, and enhances TGF-beta signaling activity in vitro. Has a role in regulation of body size.
      
 0.699
tomm-70
Mitochondrial import receptor subunit tomm-70; Receptor that accelerates the import of all mitochondrial precursor proteins; Belongs to the Tom70 family.
      
 0.697
aat-1
Amino Acid Transporter.
      
 0.692
pnk-1
PaNtothenate Kinase.
      
 0.660
hgo-1
Homogentisate 1,2-dioxygenase.
   
  
 0.654
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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