Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F42G8.10 | F54D5.4 | F42G8.10.2 | F54D5.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
| F42G8.10 | lin-36 | F42G8.10.2 | F44B9.6.1 | Uncharacterized protein. | Protein lin-36; Required to negatively regulate vulval development. Antagonizes Ras-mediated vulval induction. Acts cell autonomously. | 0.465 |
| F42G8.10 | tra-4 | F42G8.10.2 | F53B3.1.2 | Uncharacterized protein. | TRAnsformer: XX animals transformed into males. | 0.660 |
| F54D5.4 | F42G8.10 | F54D5.4.1 | F42G8.10.2 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
| F54D5.4 | tra-4 | F54D5.4.1 | F53B3.1.2 | Uncharacterized protein. | TRAnsformer: XX animals transformed into males. | 0.469 |
| fbxc-28 | tra-4 | R07C3.6.1 | F53B3.1.2 | F-box C protein. | TRAnsformer: XX animals transformed into males. | 0.502 |
| lin-36 | F42G8.10 | F44B9.6.1 | F42G8.10.2 | Protein lin-36; Required to negatively regulate vulval development. Antagonizes Ras-mediated vulval induction. Acts cell autonomously. | Uncharacterized protein. | 0.465 |
| lin-36 | tra-4 | F44B9.6.1 | F53B3.1.2 | Protein lin-36; Required to negatively regulate vulval development. Antagonizes Ras-mediated vulval induction. Acts cell autonomously. | TRAnsformer: XX animals transformed into males. | 0.545 |
| mel-11 | tra-4 | C06C3.1c.1 | F53B3.1.2 | ANK_REP_REGION domain-containing protein. | TRAnsformer: XX animals transformed into males. | 0.506 |
| nasp-1 | nath-10 | C09H10.6.1 | F55A12.8.1 | SHNi-TPR domain-containing protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.576 |
| nasp-1 | tra-4 | C09H10.6.1 | F53B3.1.2 | SHNi-TPR domain-containing protein. | TRAnsformer: XX animals transformed into males. | 0.937 |
| nasp-1 | trr-1 | C09H10.6.1 | C47D12.1a.1 | SHNi-TPR domain-containing protein. | Transcription-associated protein 1; Influences germ cell fate in hermaphrodites. Acts downstream of tra-2 and tra-3 and through the Tip60 histone acetyltransferase complex to regulate germ cell fate decisions (By similarity). Required for spermatogenesis and embryonic development (By similarity). Acts with tra-2 to promote expression of fog-3 and control male tail development (By similarity). Involved in the negative regulation of vulval development. Belongs to the PI3/PI4-kinase family. TRA1 subfamily. | 0.474 |
| nasp-2 | tra-4 | C50B6.2.1 | F53B3.1.2 | SHNi-TPR domain-containing protein. | TRAnsformer: XX animals transformed into males. | 0.471 |
| nath-10 | nasp-1 | F55A12.8.1 | C09H10.6.1 | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | SHNi-TPR domain-containing protein. | 0.576 |
| nath-10 | tra-4 | F55A12.8.1 | F53B3.1.2 | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | TRAnsformer: XX animals transformed into males. | 0.723 |
| nath-10 | trr-1 | F55A12.8.1 | C47D12.1a.1 | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | Transcription-associated protein 1; Influences germ cell fate in hermaphrodites. Acts downstream of tra-2 and tra-3 and through the Tip60 histone acetyltransferase complex to regulate germ cell fate decisions (By similarity). Required for spermatogenesis and embryonic development (By similarity). Acts with tra-2 to promote expression of fog-3 and control male tail development (By similarity). Involved in the negative regulation of vulval development. Belongs to the PI3/PI4-kinase family. TRA1 subfamily. | 0.466 |
| sdc-1 | tra-4 | F52E10.1.1 | F53B3.1.2 | Zinc finger protein sdc-1; Embryonic transcription factor regulating downstream genes involved specifically in the sex determination and dosage compensation pathways, or regulating other genes involved in the coordinate control of both processes. Component of the SDC complex that functions in sex determination and in X chromosome dosage compensation specifically in hermaphrodite (XX) animals. Involved in the recruitment of the condensin I-like dosage compensation complex to the male sex-determining autosomal gene her-1, thereby contributing to its repression and initiating hermaphrodit [...] | TRAnsformer: XX animals transformed into males. | 0.453 |
| tra-4 | F42G8.10 | F53B3.1.2 | F42G8.10.2 | TRAnsformer: XX animals transformed into males. | Uncharacterized protein. | 0.660 |
| tra-4 | F54D5.4 | F53B3.1.2 | F54D5.4.1 | TRAnsformer: XX animals transformed into males. | Uncharacterized protein. | 0.469 |
| tra-4 | fbxc-28 | F53B3.1.2 | R07C3.6.1 | TRAnsformer: XX animals transformed into males. | F-box C protein. | 0.502 |
page 1 of 2