Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C18E9.8 | hmbx-1 | C18E9.8.1 | F54A5.1.1 | Uncharacterized protein. | Homeobox domain-containing protein. | 0.453 |
dnj-11 | hmbx-1 | F38A5.13.1 | F54A5.1.1 | DNaJ domain (Prokaryotic heat shock protein). | Homeobox domain-containing protein. | 0.536 |
dnj-11 | somi-1 | F38A5.13.1 | M04G12.4a.1 | DNaJ domain (Prokaryotic heat shock protein). | Suppressor of Overexpressed MIcro-RNA. | 0.511 |
dnj-11 | sup-37 | F38A5.13.1 | C01B7.1c.1 | DNaJ domain (Prokaryotic heat shock protein). | SUPpressor. | 0.554 |
dnj-11 | zgpa-1 | F38A5.13.1 | C33H5.17.1 | DNaJ domain (Prokaryotic heat shock protein). | Zinc finger G-PAtch domain-containing protein homolog. | 0.753 |
hmbx-1 | C18E9.8 | F54A5.1.1 | C18E9.8.1 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.453 |
hmbx-1 | dnj-11 | F54A5.1.1 | F38A5.13.1 | Homeobox domain-containing protein. | DNaJ domain (Prokaryotic heat shock protein). | 0.536 |
hmbx-1 | igcm-3 | F54A5.1.1 | T02C5.3b.1 | Homeobox domain-containing protein. | ImmunoGlobulin-like Cell adhesion Molecule family. | 0.535 |
hmbx-1 | nhr-49 | F54A5.1.1 | K10C3.6c.2 | Homeobox domain-containing protein. | Nuclear hormone receptor family member nhr-49; Orphan nuclear receptor. Regulates expression of lipid desaturase, fat-7 ; Belongs to the nuclear hormone receptor family. | 0.441 |
hmbx-1 | nsy-7 | F54A5.1.1 | C18F3.4a.1 | Homeobox domain-containing protein. | Neuronal SYmmetry. | 0.811 |
hmbx-1 | pcbd-1 | F54A5.1.1 | T10B11.1.1 | Homeobox domain-containing protein. | Putative pterin-4-alpha-carbinolamine dehydratase. | 0.524 |
hmbx-1 | somi-1 | F54A5.1.1 | M04G12.4a.1 | Homeobox domain-containing protein. | Suppressor of Overexpressed MIcro-RNA. | 0.463 |
hmbx-1 | srsx-3 | F54A5.1.1 | Y97E10B.9.1 | Homeobox domain-containing protein. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.734 |
hmbx-1 | sup-37 | F54A5.1.1 | C01B7.1c.1 | Homeobox domain-containing protein. | SUPpressor. | 0.536 |
hmbx-1 | zgpa-1 | F54A5.1.1 | C33H5.17.1 | Homeobox domain-containing protein. | Zinc finger G-PAtch domain-containing protein homolog. | 0.699 |
igcm-3 | hmbx-1 | T02C5.3b.1 | F54A5.1.1 | ImmunoGlobulin-like Cell adhesion Molecule family. | Homeobox domain-containing protein. | 0.535 |
nhr-49 | hmbx-1 | K10C3.6c.2 | F54A5.1.1 | Nuclear hormone receptor family member nhr-49; Orphan nuclear receptor. Regulates expression of lipid desaturase, fat-7 ; Belongs to the nuclear hormone receptor family. | Homeobox domain-containing protein. | 0.441 |
nsy-7 | hmbx-1 | C18F3.4a.1 | F54A5.1.1 | Neuronal SYmmetry. | Homeobox domain-containing protein. | 0.811 |
nsy-7 | srsx-3 | C18F3.4a.1 | Y97E10B.9.1 | Neuronal SYmmetry. | G_PROTEIN_RECEP_F1_2 domain-containing protein. | 0.698 |
pcbd-1 | hmbx-1 | T10B11.1.1 | F54A5.1.1 | Putative pterin-4-alpha-carbinolamine dehydratase. | Homeobox domain-containing protein. | 0.524 |
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