STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F54E4.2G_PROTEIN_RECEP_F1_2 domain-containing protein. (367 aa)    
Predicted Functional Partners:
srt-29
Serpentine Receptor, class T.
   
    0.573
srr-7
Serpentine Receptor, class R.
   
    0.572
sri-27
Serpentine Receptor, class I.
   
    0.571
srd-38
Serpentine Receptor, class D (Delta).
   
    0.566
sri-71
Serpentine Receptor, class I.
   
    0.563
Y116A8C.43
Uncharacterized protein.
   
    0.561
C30E1.4
Uncharacterized protein.
   
    0.557
ZK938.3
ATPase_AAA_core domain-containing protein.
   
    0.557
srz-12
Serpentine Receptor, class Z.
   
    0.555
F59E12.8
Uncharacterized protein.
   
    0.553
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.