STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F56D6.19Uncharacterized protein. (56 aa)    
Predicted Functional Partners:
F56D6.20
Uncharacterized protein.
   
    0.538
F56D6.13
Uncharacterized protein.
   
    0.408
msrp-3
MS Related Protein.
   
    0.406
F58B4.7
Uncharacterized protein.
   
    0.403
Y73F8A.14
Uncharacterized protein.
   
    0.403
ZK849.6
Uncharacterized protein.
   
    0.403
C17F3.1
Uncharacterized protein.
   
    0.402
F56D6.12
Uncharacterized protein.
   
    0.402
K03B4.6
Uncharacterized protein.
   
    0.402
ssp-33
MSP domain-containing protein.
   
    0.402
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.