Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F11E6.3 | col-103 | F11E6.3.2 | F56B3.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.615 |
F11E6.3 | col-159 | F11E6.3.2 | F57B1.3.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.422 |
F11E6.3 | col-160 | F11E6.3.2 | F57B1.4.3 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.848 |
F11E6.3 | col-80 | F11E6.3.2 | C09G5.5.1 | Uncharacterized protein. | Putative cuticle collagen 80; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.590 |
F11E6.3 | col-93 | F11E6.3.2 | W05B2.5.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.532 |
F11E6.3 | col-98 | F11E6.3.2 | F14F7.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.590 |
T02B11.3 | col-160 | T02B11.3a.1 | F57B1.4.3 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.730 |
col-103 | F11E6.3 | F56B3.1.1 | F11E6.3.2 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.615 |
col-103 | col-159 | F56B3.1.1 | F57B1.3.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.577 |
col-103 | col-160 | F56B3.1.1 | F57B1.4.3 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.881 |
col-103 | col-80 | F56B3.1.1 | C09G5.5.1 | Col_cuticle_N domain-containing protein. | Putative cuticle collagen 80; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.650 |
col-103 | col-93 | F56B3.1.1 | W05B2.5.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.767 |
col-103 | col-98 | F56B3.1.1 | F14F7.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-103 | npr-8 | F56B3.1.1 | C56G3.1b.1 | Col_cuticle_N domain-containing protein. | Probable G-protein coupled receptor npr-8; Not known. Putative receptor; Belongs to the G-protein coupled receptor 1 family. | 0.551 |
col-159 | F11E6.3 | F57B1.3.1 | F11E6.3.2 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.422 |
col-159 | col-103 | F57B1.3.1 | F56B3.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.577 |
col-159 | col-160 | F57B1.3.1 | F57B1.4.3 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.999 |
col-159 | col-80 | F57B1.3.1 | C09G5.5.1 | Col_cuticle_N domain-containing protein. | Putative cuticle collagen 80; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.622 |
col-159 | col-93 | F57B1.3.1 | W05B2.5.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.901 |
col-159 | col-98 | F57B1.3.1 | F14F7.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.572 |
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