Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
csb-1 | ercc-1 | F53H4.1.1 | F10G8.7.2 | CSB (Cockayne Syndrome B) homolog. | ERCC (DNA excision repair protein) homolog. | 0.841 |
csb-1 | mus-81 | F53H4.1.1 | C43E11.2a.1 | CSB (Cockayne Syndrome B) homolog. | ERCC4 domain-containing protein. | 0.553 |
csb-1 | pcn-1 | F53H4.1.1 | W03D2.4.1 | CSB (Cockayne Syndrome B) homolog. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.433 |
csb-1 | xpa-1 | F53H4.1.1 | K07G5.2.1 | CSB (Cockayne Syndrome B) homolog. | XPA_C domain-containing protein. | 0.967 |
csb-1 | xpb-1 | F53H4.1.1 | Y66D12A.15.3 | CSB (Cockayne Syndrome B) homolog. | XPB (Xeroderma Pigmentosum complementation group B) related. | 0.520 |
csb-1 | xpc-1 | F53H4.1.1 | Y76B12C.2.1 | CSB (Cockayne Syndrome B) homolog. | XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog. | 0.984 |
csb-1 | xpd-1 | F53H4.1.1 | Y50D7A.2.1 | CSB (Cockayne Syndrome B) homolog. | Helicase ATP-binding domain-containing protein. | 0.775 |
csb-1 | xpf-1 | F53H4.1.1 | C47D12.8.1 | CSB (Cockayne Syndrome B) homolog. | ERCC4 domain-containing protein. | 0.921 |
csb-1 | xpg-1 | F53H4.1.1 | F57B10.6.1 | CSB (Cockayne Syndrome B) homolog. | XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog. | 0.960 |
ercc-1 | csb-1 | F10G8.7.2 | F53H4.1.1 | ERCC (DNA excision repair protein) homolog. | CSB (Cockayne Syndrome B) homolog. | 0.841 |
ercc-1 | gtf-2H1 | F10G8.7.2 | R02D3.3a.1 | ERCC (DNA excision repair protein) homolog. | General Transcription Factor homolog. | 0.820 |
ercc-1 | mus-81 | F10G8.7.2 | C43E11.2a.1 | ERCC (DNA excision repair protein) homolog. | ERCC4 domain-containing protein. | 0.997 |
ercc-1 | xpa-1 | F10G8.7.2 | K07G5.2.1 | ERCC (DNA excision repair protein) homolog. | XPA_C domain-containing protein. | 0.995 |
ercc-1 | xpb-1 | F10G8.7.2 | Y66D12A.15.3 | ERCC (DNA excision repair protein) homolog. | XPB (Xeroderma Pigmentosum complementation group B) related. | 0.849 |
ercc-1 | xpc-1 | F10G8.7.2 | Y76B12C.2.1 | ERCC (DNA excision repair protein) homolog. | XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog. | 0.957 |
ercc-1 | xpd-1 | F10G8.7.2 | Y50D7A.2.1 | ERCC (DNA excision repair protein) homolog. | Helicase ATP-binding domain-containing protein. | 0.672 |
ercc-1 | xpf-1 | F10G8.7.2 | C47D12.8.1 | ERCC (DNA excision repair protein) homolog. | ERCC4 domain-containing protein. | 0.999 |
ercc-1 | xpg-1 | F10G8.7.2 | F57B10.6.1 | ERCC (DNA excision repair protein) homolog. | XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog. | 0.905 |
gtf-2H1 | ercc-1 | R02D3.3a.1 | F10G8.7.2 | General Transcription Factor homolog. | ERCC (DNA excision repair protein) homolog. | 0.820 |
gtf-2H1 | xpa-1 | R02D3.3a.1 | K07G5.2.1 | General Transcription Factor homolog. | XPA_C domain-containing protein. | 0.941 |
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