STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrp-1Uncharacterized protein. (1534 aa)    
Predicted Functional Partners:
cft-1
Cystic Fibrosis Transmembrane conductance regulator homolog.
  
 
 
0.918
mrp-2
Uncharacterized protein.
  
 
0.905
C06G4.4
Uncharacterized protein C06G4.4.
      
 0.613
ncr-1
NPC intracellular cholesterol transporter 1 homolog 1; Involved in the uptake or utilization of cholesterol (By similarity). Ncr-1 and ncr-2 act redundantly to prevent dauer larva formation under favorable growth conditions, and are required for the normal functioning of ADF, ASI and ASG neurons. Belongs to the patched family.
   
 
 0.595
gly-5
Polypeptide N-acetylgalactosaminyltransferase 5; Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.
   
  
 0.586
mrp-5
Uncharacterized protein.
  
 
0.585
F45E10.2
MFS domain-containing protein.
   
 
 0.584
Y47G6A.5
Tyrosine-protein kinase.
   
 
 0.583
F26A10.2
Uncharacterized protein.
   
 
 0.572
K03H1.5
Uncharacterized protein K03H1.5.
   
  
 0.571
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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