Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| coh-3 | him-3 | F08H9.1.1 | ZK381.1a.2 | Rad21_Rec8 domain-containing protein. | HORMA domain-containing protein. | 0.863 |
| coh-3 | htp-1 | F08H9.1.1 | F41H10.10.1 | Rad21_Rec8 domain-containing protein. | HORMA domain-containing protein. | 0.801 |
| coh-3 | htp-2 | F08H9.1.1 | Y73B6BL.2.1 | Rad21_Rec8 domain-containing protein. | HORMA domain-containing protein. | 0.512 |
| coh-3 | htp-3 | F08H9.1.1 | F57C9.5.1 | Rad21_Rec8 domain-containing protein. | HORMA domain-containing protein. | 0.937 |
| coh-3 | rad-51 | F08H9.1.1 | Y43C5A.6a.1 | Rad21_Rec8 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. | 0.768 |
| coh-3 | rec-8 | F08H9.1.1 | W02A2.6a.1 | Rad21_Rec8 domain-containing protein. | Meiotic recombination protein rec-8; Plays a role in meiotic chromosome cohesion and segregation. Necessary for sister chromatid co- orientation and sister chromatid cohension until meiosis II. May also be required for repair of programmed meiotic double stranded breaks. During spermatogenesis, likely involved in spermatocyte centriole cohesion, thus preventing their separation during the second meiotic division. Belongs to the rad21 family. Highly divergent. | 0.947 |
| coh-3 | spo-11 | F08H9.1.1 | T05E11.4a.1 | Rad21_Rec8 domain-containing protein. | Meiotic recombination protein spo-11; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. | 0.762 |
| coh-3 | sun-1 | F08H9.1.1 | F57B1.2.1 | Rad21_Rec8 domain-containing protein. | Sun domain-containing protein 1; Involved in centrosome attachment to the nucleus. Required for zyg-12 localization to the nuclear envelope. Together with pot-1, it is required to anchor telomeres to the nuclear envelope in embryos. | 0.569 |
| coh-3 | syp-2 | F08H9.1.1 | C24G6.1.1 | Rad21_Rec8 domain-containing protein. | Uncharacterized protein. | 0.730 |
| coh-3 | syp-3 | F08H9.1.1 | F39H2.4.2 | Rad21_Rec8 domain-containing protein. | Uncharacterized protein. | 0.533 |
| him-3 | coh-3 | ZK381.1a.2 | F08H9.1.1 | HORMA domain-containing protein. | Rad21_Rec8 domain-containing protein. | 0.863 |
| him-3 | htp-1 | ZK381.1a.2 | F41H10.10.1 | HORMA domain-containing protein. | HORMA domain-containing protein. | 0.997 |
| him-3 | htp-2 | ZK381.1a.2 | Y73B6BL.2.1 | HORMA domain-containing protein. | HORMA domain-containing protein. | 0.982 |
| him-3 | htp-3 | ZK381.1a.2 | F57C9.5.1 | HORMA domain-containing protein. | HORMA domain-containing protein. | 0.995 |
| him-3 | rad-51 | ZK381.1a.2 | Y43C5A.6a.1 | HORMA domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. | 0.923 |
| him-3 | rec-8 | ZK381.1a.2 | W02A2.6a.1 | HORMA domain-containing protein. | Meiotic recombination protein rec-8; Plays a role in meiotic chromosome cohesion and segregation. Necessary for sister chromatid co- orientation and sister chromatid cohension until meiosis II. May also be required for repair of programmed meiotic double stranded breaks. During spermatogenesis, likely involved in spermatocyte centriole cohesion, thus preventing their separation during the second meiotic division. Belongs to the rad21 family. Highly divergent. | 0.883 |
| him-3 | spo-11 | ZK381.1a.2 | T05E11.4a.1 | HORMA domain-containing protein. | Meiotic recombination protein spo-11; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. | 0.925 |
| him-3 | sun-1 | ZK381.1a.2 | F57B1.2.1 | HORMA domain-containing protein. | Sun domain-containing protein 1; Involved in centrosome attachment to the nucleus. Required for zyg-12 localization to the nuclear envelope. Together with pot-1, it is required to anchor telomeres to the nuclear envelope in embryos. | 0.919 |
| him-3 | syp-2 | ZK381.1a.2 | C24G6.1.1 | HORMA domain-containing protein. | Uncharacterized protein. | 0.972 |
| him-3 | syp-3 | ZK381.1a.2 | F39H2.4.2 | HORMA domain-containing protein. | Uncharacterized protein. | 0.956 |
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