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rpl-12 protein (Caenorhabditis elegans) - STRING interaction network
"rpl-12" - 60S ribosomal protein L12 in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl-1260S ribosomal protein L12 ; Binds directly to 26S ribosomal RNA (165 aa)    
Predicted Functional Partners:
rpl-35
60S ribosomal protein L35 (123 aa)
   
  0.999
rpl-7
60S ribosomal protein L7 ; Binds to G-rich structures in 28S rRNA and in mRNAs. Plays a regulatory role in the translation apparatus; inhibits cell-free translation of mRNAs (By similarity) (244 aa)
   
  0.999
rps-3
40S ribosomal protein S3 (247 aa)
   
  0.999
rpl-16
60S ribosomal protein L13a (202 aa)
   
  0.999
rpl-17
60S ribosomal protein L17 (187 aa)
   
  0.999
rpl-25.2
60S ribosomal protein L23a 2 ; This protein binds to a specific region on the 26S rRNA (146 aa)
   
  0.999
rpl-20
60S ribosomal protein L18a (180 aa)
   
  0.999
rpl-9
60S ribosomal protein L9 (189 aa)
   
  0.999
rps-2
40S ribosomal protein S2 (272 aa)
   
  0.999
rpl-10
60S ribosomal protein L10 (214 aa)
   
  0.999
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, nematode
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