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rpl-12 protein (Caenorhabditis elegans) - STRING interaction network
"rpl-12" - 60S ribosomal protein L12 in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl-1260S ribosomal protein L12; Binds directly to 26S ribosomal RNA (165 aa)    
Predicted Functional Partners:
rpl-35
60S ribosomal protein L35; Protein RPL-35 (rpl-35) mRNA, complete cds; Belongs to the universal ribosomal protein uL29 family (123 aa)
   
  0.999
rpl-7
60S ribosomal protein L7; Binds to G-rich structures in 28S rRNA and in mRNAs. Plays a regulatory role in the translation apparatus; inhibits cell-free translation of mRNAs (By similarity) (244 aa)
   
  0.999
rpl-32
Ribosomal Protein, Large subunit; Protein RPL-32, isoform a (134 aa)
   
  0.999
rpl-19
60S ribosomal protein L19; Protein RPL-19 (rpl-19) mRNA, complete cds; Belongs to the eukaryotic ribosomal protein eL19 family (198 aa)
   
  0.999
rpl-30
Ribosomal Protein, Large subunit; Protein RPL-30, isoform a (115 aa)
     
  0.999
rpl-3
60S ribosomal protein L3; The L3 protein is a component of the large subunit of cytoplasmic ribosomes (401 aa)
   
  0.999
rpl-20
60S ribosomal protein L18a ; Belongs to the eukaryotic ribosomal protein eL20 family (180 aa)
   
  0.999
rpl-9
60S ribosomal protein L9; Protein RPL-9 (rpl-9) mRNA, complete cds; Belongs to the universal ribosomal protein uL6 family (189 aa)
   
  0.999
rps-3
40S ribosomal protein S3; Protein RPS-3 (rps-3) mRNA, complete cds; Belongs to the universal ribosomal protein uS3 family (247 aa)
   
  0.999
rps-25
40S ribosomal protein S25; Protein RPS-25 (rps-25) mRNA, complete cds; Belongs to the eukaryotic ribosomal protein eS25 family (117 aa)
     
  0.999
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, roundworm
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