STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gta-1Probable 4-aminobutyrate aminotransferase, mitochondrial. (483 aa)    
Predicted Functional Partners:
alh-7
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.990
unc-25
Glutamic acid decarboxylase.
  
 0.976
alh-1
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.975
alh-8
Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA (By similarity); Belongs to the aldehyde dehydrogenase family.
   
 
 0.974
alh-9
Putative aldehyde dehydrogenase family 7 member A1 homolog; Belongs to the aldehyde dehydrogenase family.
  
 0.973
alh-12
Aldedh domain-containing protein.
  
 0.971
T09B4.8
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
0.970
B0250.5
Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial.
   
 
 0.969
F54C8.1
Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
   
 
 0.968
alh-5
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.965
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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