STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nas-3Zinc metalloproteinase nas-3; Metalloprotease. (292 aa)    
Predicted Functional Partners:
nas-16
Zinc metalloproteinase nas-16; Metalloprotease.
  
   
 0.898
C37H5.13
Uncharacterized protein.
   
  
 0.814
clec-89
C-type LECtin.
      
 0.812
C30B5.7
Uncharacterized protein.
      
 0.812
pes-8
Patterned Expression Site.
      
 0.804
nlp-32
Neuropeptide-like protein 32; May have antimicrobial activity; Belongs to the YARP (YGGW-amide related peptide) family.
      
 0.740
nas-21
Zinc metalloproteinase-like protein nas-21; May lack metalloprotease activity.
  
   
 0.730
nas-31
Zinc metalloproteinase nas-31; Metalloprotease.
  
   
 0.727
arrd-24
Arrestin_C domain-containing protein.
      
 0.699
ugt-33
UDP-GlucuronosylTransferase.
      
 0.698
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.