Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C30H6.8 | D1007.10 | C30H6.8.2 | D1007.10b.1 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.666 |
C30H6.8 | K07C5.2 | C30H6.8.2 | K07C5.2.1 | Thioredoxin domain-containing protein. | Aldo_ket_red domain-containing protein. | 0.846 |
C30H6.8 | T23G11.4 | C30H6.8.2 | T23G11.4.1 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.846 |
C30H6.8 | afmd-1 | C30H6.8.2 | D2024.2.1 | Thioredoxin domain-containing protein. | Abhydrolase_3 domain-containing protein. | 0.615 |
C30H6.8 | crn-7 | C30H6.8.2 | F09G8.2.1 | Thioredoxin domain-containing protein. | Cell-death-related nuclease 7; Belongs to the DNase II family. | 0.615 |
C30H6.8 | glrx-5 | C30H6.8.2 | Y49E10.2.1 | Thioredoxin domain-containing protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.663 |
C30H6.8 | mdt-18 | C30H6.8.2 | C55B7.9a.3 | Thioredoxin domain-containing protein. | Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.807 |
C30H6.8 | mdt-22 | C30H6.8.2 | ZK970.3.1 | Thioredoxin domain-containing protein. | Mediator of RNA polymerase II transcription subunit 22; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.846 |
C30H6.8 | pdxk-1 | C30H6.8.2 | F57C9.1b.1 | Thioredoxin domain-containing protein. | Putative pyridoxal kinase; Required for synthesis of pyridoxal-5-phosphate from vitamin B6. | 0.604 |
D1007.10 | C30H6.8 | D1007.10b.1 | C30H6.8.2 | Uncharacterized protein. | Thioredoxin domain-containing protein. | 0.666 |
D1007.10 | K07C5.2 | D1007.10b.1 | K07C5.2.1 | Uncharacterized protein. | Aldo_ket_red domain-containing protein. | 0.846 |
D1007.10 | T23G11.4 | D1007.10b.1 | T23G11.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.631 |
D1007.10 | afmd-1 | D1007.10b.1 | D2024.2.1 | Uncharacterized protein. | Abhydrolase_3 domain-containing protein. | 0.846 |
D1007.10 | crn-7 | D1007.10b.1 | F09G8.2.1 | Uncharacterized protein. | Cell-death-related nuclease 7; Belongs to the DNase II family. | 0.611 |
D1007.10 | glrx-5 | D1007.10b.1 | Y49E10.2.1 | Uncharacterized protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.846 |
D1007.10 | mdt-18 | D1007.10b.1 | C55B7.9a.3 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.677 |
D1007.10 | mdt-22 | D1007.10b.1 | ZK970.3.1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 22; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.846 |
D1007.10 | pdxk-1 | D1007.10b.1 | F57C9.1b.1 | Uncharacterized protein. | Putative pyridoxal kinase; Required for synthesis of pyridoxal-5-phosphate from vitamin B6. | 0.564 |
K07C5.2 | C30H6.8 | K07C5.2.1 | C30H6.8.2 | Aldo_ket_red domain-containing protein. | Thioredoxin domain-containing protein. | 0.846 |
K07C5.2 | D1007.10 | K07C5.2.1 | D1007.10b.1 | Aldo_ket_red domain-containing protein. | Uncharacterized protein. | 0.846 |
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