STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catp-5Cation-transporting ATPase catp-5; Involved in the uptake and/or transport of polyamines, probably through ATP hydrolysis. This contributes to the maintenance of intracellular polyamine levels. Polyamines are essential for cell proliferation and are implicated in cellular processes, ranging from DNA replication to apoptosis. (1203 aa)    
Predicted Functional Partners:
mam-3
MAM domain-containing protein.
      
 0.807
gem-1
Gon-2 Extragenic Modifier.
   
  
 0.710
tbca-1
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.702
B0454.6
AA_permease_C domain-containing protein.
   
 
 0.694
mam-1
MAM domain-containing protein.
   
  
 0.674
gst-27
Glutathione S-Transferase.
   
  
 0.630
C35A5.3
MFS domain-containing protein.
   
  
 0.624
C23H4.6
AAA_23 domain-containing protein.
     
 0.622
ral-1
RAL (Ras-related GTPase) homolog.
   
 
 0.620
ugt-10
UDP-GlucuronosylTransferase.
   
  
 0.617
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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