Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| let-4 | lpr-3 | C44H4.2.1 | W04G3.8.1 | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | LiPocalin-Related protein. | 0.921 |
| let-4 | mua-3 | C44H4.2.1 | K08E5.3a.1 | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | Transmembrane cell adhesion receptor mua-3; Involved in cell adhesion and required for organ positioning and attachment. At the hypodermal surface, required for attachment of the hypdermermis to the basal cuticle in postembryonic development, possibly through intermediate filaments of the cytoskeleton. | 0.750 |
| let-4 | mup-4 | C44H4.2.1 | K07D8.1.1 | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | Transmembrane matrix receptor MUP-4; Required for junctional attachments between hypodermis and muscle, and between the apical epithelial surface and the cuticular matrix. Essential for enclosure of the embryo by the hypodermis, hypodermal integrity, embryo elongation, and maintenance of hypodermal morphology in fully elongated embryos. | 0.725 |
| let-4 | noah-1 | C44H4.2.1 | C34G6.6b.1 | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). | 0.923 |
| let-4 | noah-2 | C44H4.2.1 | F52B11.3.1 | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). | 0.887 |
| let-4 | sym-1 | C44H4.2.1 | C44H4.3.1 | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | SYM-1 protein. | 0.999 |
| let-805 | mua-3 | H19M22.2b.1 | K08E5.3a.1 | Myotactin form B. | Transmembrane cell adhesion receptor mua-3; Involved in cell adhesion and required for organ positioning and attachment. At the hypodermal surface, required for attachment of the hypdermermis to the basal cuticle in postembryonic development, possibly through intermediate filaments of the cytoskeleton. | 0.881 |
| let-805 | mup-4 | H19M22.2b.1 | K07D8.1.1 | Myotactin form B. | Transmembrane matrix receptor MUP-4; Required for junctional attachments between hypodermis and muscle, and between the apical epithelial surface and the cuticular matrix. Essential for enclosure of the embryo by the hypodermis, hypodermal integrity, embryo elongation, and maintenance of hypodermal morphology in fully elongated embryos. | 0.826 |
| let-805 | noah-1 | H19M22.2b.1 | C34G6.6b.1 | Myotactin form B. | NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). | 0.444 |
| let-805 | pat-2 | H19M22.2b.1 | F54F2.1.1 | Myotactin form B. | Integrin alpha pat-2; Required for muscle development probably through the regulation of the actin-myosin cytoskeleton. Component of an integrin containing attachment complex, which is required for muscle maintenance. During the formation of neuromuscular junctions at the larval stage, negatively regulates membrane protrusion from body wall muscles, probably through lamins such as epi-1, lam-2 and unc-52. Required for distal tip cell migration and dorsal pathfinding. Required for egg-laying. May play a role in cell motility and cell-cell interactions (By similarity). Plays a role in vu [...] | 0.552 |
| let-805 | pat-3 | H19M22.2b.1 | ZK1058.2.1 | Myotactin form B. | Integrin beta pat-3; Integrin alpha ina-1/beta pat-3 is a receptor for laminin. Integrin alpha pat-2/beta pat-3 recognizes the sequence R-G-D in its ligands (Probable). Plays a role in cell migration, morphogenesis and probably in cell-cell interactions. During gonad morphogenesis, involved in distal tip cell (DTC)-mediated guidance of gonad elongation, in maintaining their sharp tapering morphology and in their migration. Component of an integrin containing attachment complex, which is required for muscle development and maintenance. Involved in the assembly of dense bodies and M line [...] | 0.469 |
| let-805 | vab-10 | H19M22.2b.1 | ZK1151.1l.1 | Myotactin form B. | GAR domain-containing protein. | 0.884 |
| lpr-3 | let-4 | W04G3.8.1 | C44H4.2.1 | LiPocalin-Related protein. | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | 0.921 |
| lpr-3 | mua-3 | W04G3.8.1 | K08E5.3a.1 | LiPocalin-Related protein. | Transmembrane cell adhesion receptor mua-3; Involved in cell adhesion and required for organ positioning and attachment. At the hypodermal surface, required for attachment of the hypdermermis to the basal cuticle in postembryonic development, possibly through intermediate filaments of the cytoskeleton. | 0.617 |
| lpr-3 | mup-4 | W04G3.8.1 | K07D8.1.1 | LiPocalin-Related protein. | Transmembrane matrix receptor MUP-4; Required for junctional attachments between hypodermis and muscle, and between the apical epithelial surface and the cuticular matrix. Essential for enclosure of the embryo by the hypodermis, hypodermal integrity, embryo elongation, and maintenance of hypodermal morphology in fully elongated embryos. | 0.544 |
| lpr-3 | noah-1 | W04G3.8.1 | C34G6.6b.1 | LiPocalin-Related protein. | NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). | 0.932 |
| lpr-3 | noah-2 | W04G3.8.1 | F52B11.3.1 | LiPocalin-Related protein. | NOmpA Homolog (Drosophila nompA: no mechanoreceptor potential A). | 0.999 |
| lpr-3 | sym-1 | W04G3.8.1 | C44H4.3.1 | LiPocalin-Related protein. | SYM-1 protein. | 0.983 |
| mua-3 | let-4 | K08E5.3a.1 | C44H4.2.1 | Transmembrane cell adhesion receptor mua-3; Involved in cell adhesion and required for organ positioning and attachment. At the hypodermal surface, required for attachment of the hypdermermis to the basal cuticle in postembryonic development, possibly through intermediate filaments of the cytoskeleton. | Leucine-rich repeat-containing protein let-4; Required for apical extracellular matrix organization and epithelial junction maintenance. | 0.750 |
| mua-3 | let-805 | K08E5.3a.1 | H19M22.2b.1 | Transmembrane cell adhesion receptor mua-3; Involved in cell adhesion and required for organ positioning and attachment. At the hypodermal surface, required for attachment of the hypdermermis to the basal cuticle in postembryonic development, possibly through intermediate filaments of the cytoskeleton. | Myotactin form B. | 0.881 |
page 1 of 4