Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
abt-1 | haf-6 | C24F3.5a.1 | Y48G8AL.11a.1 | ABC transporter domain-containing protein. | HAlF transporter (PGP related). | 0.600 |
abt-1 | pgp-1 | C24F3.5a.1 | K08E7.9.1 | ABC transporter domain-containing protein. | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | 0.599 |
abt-1 | pgp-11 | C24F3.5a.1 | DH11.3.1 | ABC transporter domain-containing protein. | p-GlycoProtein related. | 0.534 |
abt-1 | pgp-12 | C24F3.5a.1 | F22E10.1.1 | ABC transporter domain-containing protein. | p-GlycoProtein related. | 0.593 |
abt-1 | pgp-3 | C24F3.5a.1 | ZK455.7.2 | ABC transporter domain-containing protein. | Multidrug resistance protein pgp-3; Mediates ATP-dependent export of organic anions and xenobiotics from the cytoplasm. Hydrolyzes ATP with low efficiency (By similarity); Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | 0.540 |
avr-15 | pgp-1 | R11G10.1a.1 | K08E7.9.1 | Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | 0.597 |
avr-15 | pgp-10 | R11G10.1a.1 | C54D1.1.1 | Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | p-GlycoProtein related. | 0.447 |
avr-15 | pgp-11 | R11G10.1a.1 | DH11.3.1 | Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | p-GlycoProtein related. | 0.439 |
avr-15 | pgp-12 | R11G10.1a.1 | F22E10.1.1 | Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | p-GlycoProtein related. | 0.673 |
haf-6 | abt-1 | Y48G8AL.11a.1 | C24F3.5a.1 | HAlF transporter (PGP related). | ABC transporter domain-containing protein. | 0.600 |
haf-6 | pgp-1 | Y48G8AL.11a.1 | K08E7.9.1 | HAlF transporter (PGP related). | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | 0.602 |
haf-6 | pgp-10 | Y48G8AL.11a.1 | C54D1.1.1 | HAlF transporter (PGP related). | p-GlycoProtein related. | 0.587 |
haf-6 | pgp-11 | Y48G8AL.11a.1 | DH11.3.1 | HAlF transporter (PGP related). | p-GlycoProtein related. | 0.600 |
haf-6 | pgp-12 | Y48G8AL.11a.1 | F22E10.1.1 | HAlF transporter (PGP related). | p-GlycoProtein related. | 0.611 |
haf-6 | pgp-3 | Y48G8AL.11a.1 | ZK455.7.2 | HAlF transporter (PGP related). | Multidrug resistance protein pgp-3; Mediates ATP-dependent export of organic anions and xenobiotics from the cytoplasm. Hydrolyzes ATP with low efficiency (By similarity); Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | 0.615 |
ifb-2 | pgp-1 | F10C1.7e.1 | K08E7.9.1 | Intermediate filament protein ifb-2; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein. Component of the terminal web (organelle-depleted, intermediate filament-rich layer of cytoplasm that underlies the apical microvilli of polarized epithelial cells) in embryonic through to adult gut cells. Correct localization of filaments requires let-413. | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | 0.619 |
pgp-1 | abt-1 | K08E7.9.1 | C24F3.5a.1 | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | ABC transporter domain-containing protein. | 0.599 |
pgp-1 | avr-15 | K08E7.9.1 | R11G10.1a.1 | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.597 |
pgp-1 | haf-6 | K08E7.9.1 | Y48G8AL.11a.1 | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | HAlF transporter (PGP related). | 0.602 |
pgp-1 | ifb-2 | K08E7.9.1 | F10C1.7e.1 | Multidrug resistance protein pgp-1; Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells; Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. | Intermediate filament protein ifb-2; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein. Component of the terminal web (organelle-depleted, intermediate filament-rich layer of cytoplasm that underlies the apical microvilli of polarized epithelial cells) in embryonic through to adult gut cells. Correct localization of filaments requires let-413. | 0.619 |
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