STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp-14A1CYtochrome P450 family; Belongs to the cytochrome P450 family. (491 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.811
C04F5.9
Uncharacterized protein.
   
 
 0.707
srg-14
Serpentine receptor class gamma-14.
      
 0.699
irg-1
DUF1768 domain-containing protein.
      
 0.547
sex-1
Steroid hormone receptor family member cnr14; Belongs to the nuclear hormone receptor family. NR1 subfamily.
      
 0.533
W09D6.1
AMP-binding domain-containing protein.
  
 0.523
F37C12.3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.517
Y56A3A.19
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.517
puf-12
Pumilio domain-containing protein 12.
   
  
 0.500
nrps-1
NonRibosomal Peptide Synthetase.
  
 0.493
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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