STRINGSTRING
K09A9.6 protein (Caenorhabditis elegans) - STRING interaction network
"K09A9.6" - Protein K09A9.6, isoform b in Caenorhabditis elegans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K09A9.6Protein K09A9.6, isoform b (920 aa)    
Predicted Functional Partners:
csq-1
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium-binding protein and thus acts as an internal calcium store in muscle (417 aa)
     
   
  0.722
unc-68
Protein UNC-68, isoform c (unc-68) mRNA, complete cds (5387 aa)
     
   
  0.648
pisy-1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Protein PISY-1 (pisy-1) mRNA, complete cds (220 aa)
         
  0.604
mon-2
Monensin-resistant homolog 2; May be required for traffic between late Golgi and early endosomes (1648 aa)
           
  0.518
lin-40
Protein LIN-40, isoform d (1022 aa)
           
  0.511
ncx-2
Na/Ca eXchangers; Protein NCX-2, isoform d; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (975 aa)
     
        0.441
E01A2.2
Serrate RNA effector molecule homolog; Acts as a mediator between the cap-binding complex (CBC) and the primary microRNAs (miRNAs) processing machinery. Contributes to the stability and delivery of capped primary miRNA transcripts to the primary miRNA processing complex, thereby playing a role in RNA-mediated gene silencing (RNAi) by miRNAs (By similarity) (712 aa)
           
  0.433
F37A8.5
Protein F37A8.5 (F37A8.5) mRNA, complete cds; Belongs to the yippee family (137 aa)
     
   
  0.432
cor-1
Coronin-like protein cor-1; Required to direct the migration of Q neuroblasts along the anterior axis of the body during larval development. This is dependent on its asymmetric expression in Q neuroblasts; Belongs to the WD repeat coronin family (607 aa)
     
   
  0.432
myo-3
Myosin-3; Essential for muscle contraction. Involved in ovulation likely by regulating the contraction of gonadal myoepithelial sheath cells; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family (1969 aa)
     
        0.431
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, roundworm
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