STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pad-2GDP-fucose protein O-fucosyltransferase 2; Catalyzes the reaction that attaches fucose through an O- glycosidic linkage to a conserved serine or threonine residue in the consensus sequence C1-X(2,3)-S/T-C2-X(2)-G of thrombospondin type I repeats (TSRs) where C1 and C2 are the first and second cysteines of the repeat, respectively. O-fucosylates members of several protein families including the ADAMTS superfamily and the thrombosporin (TSP) and spondin families. Required for the proper secretion of ADAMTS family members such as ADAMSL1 and ADAMST13 (By similarity). Belongs to the glycos [...] (426 aa)    
Predicted Functional Partners:
C15C7.7
GDP-fucose protein O-fucosyltransferase 1; Catalyzes the reaction that attaches fucose through an O- glycosidic linkage to a conserved serine or threonine residue in EGF domains; Belongs to the glycosyltransferase 65 family.
     
 0.962
ZC250.2
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
      
 0.909
C02H6.1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
      
 0.825
C16D9.6
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
   
  
 0.825
C17A2.3
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
      
 0.825
F56H6.1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
      
 0.825
T09E11.12
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
      
 0.825
E03H4.3
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
      
 0.821
W03G11.3
Putative alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins; Belongs to the glycosyl hydrolase 29 family.
      
 0.808
C38H2.2
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins.
      
 0.757
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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