STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
suro-1Putative carboxypeptidase suro-1; May play a role in processing or organization of cuticle collagen proteins, including rol-6 and col-19. (664 aa)    
Predicted Functional Partners:
F56D5.3
Oxidored_FMN domain-containing protein.
      
 0.699
ztf-1
Zinc finger transcription factor family protein 1.
      
 0.691
acs-20
Fatty Acid CoA Synthetase family.
   
  
 0.628
col-65
Col_cuticle_N domain-containing protein.
   
  
 0.581
bed-3
Zinc finger BED domain-containing protein 3; Probable transcription factor involved in vulval organogenesis. During vulval development, may play a role in the regulation of cell cycle regulators such as cul-1. Plays a role in larval molting.
   
  
 0.569
H23N18.5
Uncharacterized protein.
   
    0.547
ZK180.5
Uncharacterized protein.
   
   0.544
H10E21.4
Uncharacterized protein.
   
    0.539
F10D11.6
BPI2 domain-containing protein.
   
    0.538
R12E2.7
Uncharacterized protein.
   
    0.538
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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