Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T19D12.9 | slc-17.9 | T19D12.9.1 | T09B9.2.1 | MFS domain-containing protein. | MFS domain-containing protein. | 0.521 |
T19D12.9 | unc-8 | T19D12.9.1 | R13A1.4c.1 | MFS domain-containing protein. | Degenerin unc-8. | 0.696 |
Y19D10A.11 | slc-17.9 | Y19D10A.11a.1 | T09B9.2.1 | annotation not available | MFS domain-containing protein. | 0.539 |
Y19D10A.11 | unc-8 | Y19D10A.11a.1 | R13A1.4c.1 | annotation not available | Degenerin unc-8. | 0.691 |
deg-3 | unc-8 | K03B8.9.1 | R13A1.4c.1 | Acetylcholine receptor subunit alpha-type deg-3; Subunit of the non-synaptic neuronal acetylcholine receptor, which may play a role in chemotaxis towards choline. After binding choline or acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion- conducting channel across the plasma membrane ; Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily. | Degenerin unc-8. | 0.670 |
degt-1 | del-7 | F25D1.4.1 | C46A5.2.1 | DEGenerin-related Touch-involved channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.600 |
degt-1 | del-9 | F25D1.4.1 | C18B2.6.1 | DEGenerin-related Touch-involved channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.666 |
degt-1 | trp-4 | F25D1.4.1 | Y71A12B.4.1 | DEGenerin-related Touch-involved channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. | 0.812 |
degt-1 | unc-8 | F25D1.4.1 | R13A1.4c.1 | DEGenerin-related Touch-involved channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Degenerin unc-8. | 0.887 |
del-7 | degt-1 | C46A5.2.1 | F25D1.4.1 | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | DEGenerin-related Touch-involved channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.600 |
del-7 | del-9 | C46A5.2.1 | C18B2.6.1 | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.931 |
del-7 | unc-8 | C46A5.2.1 | R13A1.4c.1 | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Degenerin unc-8. | 0.664 |
del-9 | degt-1 | C18B2.6.1 | F25D1.4.1 | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | DEGenerin-related Touch-involved channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.666 |
del-9 | del-7 | C18B2.6.1 | C46A5.2.1 | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.931 |
del-9 | unc-8 | C18B2.6.1 | R13A1.4c.1 | DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Degenerin unc-8. | 0.792 |
irx-1 | unc-8 | C36F7.1.1 | R13A1.4c.1 | Putative iroquois-class homeodomain protein irx-1. | Degenerin unc-8. | 0.696 |
slc-17.9 | T19D12.9 | T09B9.2.1 | T19D12.9.1 | MFS domain-containing protein. | MFS domain-containing protein. | 0.521 |
slc-17.9 | Y19D10A.11 | T09B9.2.1 | Y19D10A.11a.1 | MFS domain-containing protein. | annotation not available | 0.539 |
slc-17.9 | unc-8 | T09B9.2.1 | R13A1.4c.1 | MFS domain-containing protein. | Degenerin unc-8. | 0.691 |
trp-4 | degt-1 | Y71A12B.4.1 | F25D1.4.1 | ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. | DEGenerin-related Touch-involved channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.812 |
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