Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F20C5.6 | W04A8.4 | F20C5.6.1 | W04A8.4a.1 | Uncharacterized protein. | 3'-5' exonuclease domain-containing protein. | 0.908 |
F20C5.6 | ceh-13 | F20C5.6.1 | R13A5.5.2 | Uncharacterized protein. | Homeobox protein ceh-13. | 0.482 |
W04A8.4 | F20C5.6 | W04A8.4a.1 | F20C5.6.1 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.908 |
W04A8.4 | ceh-13 | W04A8.4a.1 | R13A5.5.2 | 3'-5' exonuclease domain-containing protein. | Homeobox protein ceh-13. | 0.566 |
ceh-13 | F20C5.6 | R13A5.5.2 | F20C5.6.1 | Homeobox protein ceh-13. | Uncharacterized protein. | 0.482 |
ceh-13 | W04A8.4 | R13A5.5.2 | W04A8.4a.1 | Homeobox protein ceh-13. | 3'-5' exonuclease domain-containing protein. | 0.566 |
ceh-13 | ceh-20 | R13A5.5.2 | F31E3.1.1 | Homeobox protein ceh-13. | Homeobox protein ceh-20; Transcription factor that binds to the 5'-TGATNNAT(G/T)(G/A)- 3' PBC/Hox lineage enhancer region of sem-2 to promote cell fate specification in the postembryonic mesoderm (also known as the M lineage). Has a role in the mig-13 pathway to promote the guidance, migration and positioning of Q neuroblasts and their descendants along the anteroposterior body axis and the anterior migration of BDU interneurons. Also required for normal vulval formation. | 0.907 |
ceh-13 | ceh-40 | R13A5.5.2 | F17A2.5.1 | Homeobox protein ceh-13. | Homeobox protein ceh-40; Belongs to the TALE/PBX homeobox family. | 0.805 |
ceh-13 | ceh-60 | R13A5.5.2 | F22A3.5.1 | Homeobox protein ceh-13. | Homeobox domain-containing protein. | 0.598 |
ceh-13 | cwn-2 | R13A5.5.2 | W01B6.1.1 | Homeobox protein ceh-13. | Protein Wnt-2; Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters. Involved in the correct positioning of the developing nerve ring and in axon guidance of SIA and SIB neurons, probably by binding to tyrosine kinase receptor cam-1. In addition, regulates the positioning of some head neuronal cells, muscle arms associated with the nerve ring and the excretory pore. Together with Wnt ligand cwn- [...] | 0.483 |
ceh-13 | mec-3 | R13A5.5.2 | F01D4.6a.1 | Homeobox protein ceh-13. | Mechanosensory protein 3; Specifies differentiation of the set of six touch receptor neurons. Binds cooperatively as a heterodimer with unc-86 to sites in the mec-3 gene promoter. | 0.500 |
ceh-13 | nob-1 | R13A5.5.2 | Y75B8A.2a.1 | Homeobox protein ceh-13. | Homeobox domain-containing protein. | 0.603 |
ceh-13 | php-3 | R13A5.5.2 | Y75B8A.1.1 | Homeobox protein ceh-13. | Homeobox domain-containing protein. | 0.583 |
ceh-13 | unc-62 | R13A5.5.2 | T28F12.2a.2 | Homeobox protein ceh-13. | Homeobox protein unc-62; Acts redundantly with ceh-20 and ceh-40 to perform overlapping roles during embryogenesis. Required for postembryonic development of the ectoderm, including the Q, V and P cell lineages, playing a crucial role in ensuring that these cells and their descendants undergo their invariant patterns of cell division, migration, fusion and morphogenesis. Has a role in the mig-13 pathway to promote anterior migration of neuroblasts in the Q lineage. Required for multiple roles in regulating vulva development. Belongs to the TALE/MEIS homeobox family. | 0.595 |
ceh-20 | ceh-13 | F31E3.1.1 | R13A5.5.2 | Homeobox protein ceh-20; Transcription factor that binds to the 5'-TGATNNAT(G/T)(G/A)- 3' PBC/Hox lineage enhancer region of sem-2 to promote cell fate specification in the postembryonic mesoderm (also known as the M lineage). Has a role in the mig-13 pathway to promote the guidance, migration and positioning of Q neuroblasts and their descendants along the anteroposterior body axis and the anterior migration of BDU interneurons. Also required for normal vulval formation. | Homeobox protein ceh-13. | 0.907 |
ceh-20 | mec-3 | F31E3.1.1 | F01D4.6a.1 | Homeobox protein ceh-20; Transcription factor that binds to the 5'-TGATNNAT(G/T)(G/A)- 3' PBC/Hox lineage enhancer region of sem-2 to promote cell fate specification in the postembryonic mesoderm (also known as the M lineage). Has a role in the mig-13 pathway to promote the guidance, migration and positioning of Q neuroblasts and their descendants along the anteroposterior body axis and the anterior migration of BDU interneurons. Also required for normal vulval formation. | Mechanosensory protein 3; Specifies differentiation of the set of six touch receptor neurons. Binds cooperatively as a heterodimer with unc-86 to sites in the mec-3 gene promoter. | 0.412 |
ceh-20 | nob-1 | F31E3.1.1 | Y75B8A.2a.1 | Homeobox protein ceh-20; Transcription factor that binds to the 5'-TGATNNAT(G/T)(G/A)- 3' PBC/Hox lineage enhancer region of sem-2 to promote cell fate specification in the postembryonic mesoderm (also known as the M lineage). Has a role in the mig-13 pathway to promote the guidance, migration and positioning of Q neuroblasts and their descendants along the anteroposterior body axis and the anterior migration of BDU interneurons. Also required for normal vulval formation. | Homeobox domain-containing protein. | 0.898 |
ceh-20 | php-3 | F31E3.1.1 | Y75B8A.1.1 | Homeobox protein ceh-20; Transcription factor that binds to the 5'-TGATNNAT(G/T)(G/A)- 3' PBC/Hox lineage enhancer region of sem-2 to promote cell fate specification in the postembryonic mesoderm (also known as the M lineage). Has a role in the mig-13 pathway to promote the guidance, migration and positioning of Q neuroblasts and their descendants along the anteroposterior body axis and the anterior migration of BDU interneurons. Also required for normal vulval formation. | Homeobox domain-containing protein. | 0.927 |
ceh-20 | unc-62 | F31E3.1.1 | T28F12.2a.2 | Homeobox protein ceh-20; Transcription factor that binds to the 5'-TGATNNAT(G/T)(G/A)- 3' PBC/Hox lineage enhancer region of sem-2 to promote cell fate specification in the postembryonic mesoderm (also known as the M lineage). Has a role in the mig-13 pathway to promote the guidance, migration and positioning of Q neuroblasts and their descendants along the anteroposterior body axis and the anterior migration of BDU interneurons. Also required for normal vulval formation. | Homeobox protein unc-62; Acts redundantly with ceh-20 and ceh-40 to perform overlapping roles during embryogenesis. Required for postembryonic development of the ectoderm, including the Q, V and P cell lineages, playing a crucial role in ensuring that these cells and their descendants undergo their invariant patterns of cell division, migration, fusion and morphogenesis. Has a role in the mig-13 pathway to promote anterior migration of neuroblasts in the Q lineage. Required for multiple roles in regulating vulva development. Belongs to the TALE/MEIS homeobox family. | 0.975 |
ceh-40 | ceh-13 | F17A2.5.1 | R13A5.5.2 | Homeobox protein ceh-40; Belongs to the TALE/PBX homeobox family. | Homeobox protein ceh-13. | 0.805 |
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