STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abu-11Activated in Blocked Unfolded protein response. (395 aa)    
Predicted Functional Partners:
abu-8
Activated in Blocked Unfolded protein response.
   
  
 0.937
abu-10
Activated in Blocked Unfolded protein response.
   
 
 0.924
abu-6
Activated in Blocked Unfolded protein response.
   
  
 0.892
pqn-54
Prion-like-(Q/N-rich)-domain-bearing protein.
   
  
 0.871
pqn-74
Chitin-binding type-2 domain-containing protein.
   
 
 0.856
abu-14
Activated in Blocked Unfolded protein response.
   
  
 0.854
pqn-63
Prion-like-(Q/N-rich)-domain-bearing protein.
   
 
 0.792
pqn-13
Prion-like-(Q/N-rich)-domain-bearing protein.
   
 
 0.740
pqn-57
Activated in Blocked Unfolded protein response; Prion-like-(Q/N-rich)-domain-bearing protein.
   
  
 0.719
abu-9
Activated in Blocked Unfolded protein response.
   
  
 0.713
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.