STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnj-17J domain-containing protein. (485 aa)    
Predicted Functional Partners:
C16A3.4
C2H2-type domain-containing protein.
   
 
 0.807
str-82
Seven TM Receptor.
   
  
 0.765
T25G3.3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.765
F13C5.3
Uncharacterized protein.
      
 0.760
W08E12.7
Peptidase_M24 domain-containing protein.
   
 
 0.760
W03C9.5
Uncharacterized protein.
   
  
 0.702
cec-6
Chromo domain-containing protein.
   
  
 0.701
ctf-18
AAA domain-containing protein.
   
  
 0.670
eif-6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. Involved in miRNA-mediated gene silencing.
   
 
 0.654
F54F2.9
Uncharacterized protein F54F2.9.
   
 
0.648
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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