STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
let-355Uncharacterized protein. (856 aa)    
Predicted Functional Partners:
F27C1.6
Uncharacterized protein.
   
 
 0.955
H20J04.4
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 
 0.881
Y46E12BL.2
NUC173 domain-containing protein.
   
 
 0.868
F55F8.2
Uncharacterized protein.
  
 
 0.863
ddx-27
DEAD boX helicase homolog; Belongs to the DEAD box helicase family.
  
 
 0.847
byn-1
Uncharacterized protein byn-1; Belongs to the bystin family.
   
 
 0.824
ZK686.2
Putative ATP-dependent RNA helicase ZK686.2; Probable ATP-binding RNA helicase; Belongs to the DEAD box helicase family.
  
 
 0.822
F33D11.10
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 
 0.801
Y45F10D.7
Uncharacterized protein.
   
 
 0.801
T26G10.1
Putative ATP-dependent RNA helicase T26G10.1; Probable ATP-dependent RNA helicase which may be involved in ribosome biogenesis.
  
 
 0.798
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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