Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T21G5.1 | T25B9.6 | T21G5.1.1 | T25B9.6a.1 | Tyrosine-protein kinase. | Uncharacterized protein. | 0.890 |
T21G5.1 | Y57G11C.6 | T21G5.1.1 | Y57G11C.6.1 | Tyrosine-protein kinase. | Protein Tyrosine Phosphatase. | 0.893 |
T21G5.1 | col-146 | T21G5.1.1 | T06E4.6.1 | Tyrosine-protein kinase. | Col_cuticle_N domain-containing protein. | 0.687 |
T21G5.1 | dhs-14 | T21G5.1.1 | R05D8.8.1 | Tyrosine-protein kinase. | DeHydrogenases, Short chain. | 0.829 |
T21G5.1 | gska-3 | T21G5.1.1 | C36B1.10.1 | Tyrosine-protein kinase. | Protein kinase domain-containing protein. | 0.870 |
T25B9.6 | T21G5.1 | T25B9.6a.1 | T21G5.1.1 | Uncharacterized protein. | Tyrosine-protein kinase. | 0.890 |
T25B9.6 | Y57G11C.6 | T25B9.6a.1 | Y57G11C.6.1 | Uncharacterized protein. | Protein Tyrosine Phosphatase. | 0.908 |
T25B9.6 | col-146 | T25B9.6a.1 | T06E4.6.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.671 |
T25B9.6 | dhs-14 | T25B9.6a.1 | R05D8.8.1 | Uncharacterized protein. | DeHydrogenases, Short chain. | 0.807 |
T25B9.6 | gska-3 | T25B9.6a.1 | C36B1.10.1 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.894 |
Y57G11C.6 | T21G5.1 | Y57G11C.6.1 | T21G5.1.1 | Protein Tyrosine Phosphatase. | Tyrosine-protein kinase. | 0.893 |
Y57G11C.6 | T25B9.6 | Y57G11C.6.1 | T25B9.6a.1 | Protein Tyrosine Phosphatase. | Uncharacterized protein. | 0.908 |
Y57G11C.6 | col-146 | Y57G11C.6.1 | T06E4.6.1 | Protein Tyrosine Phosphatase. | Col_cuticle_N domain-containing protein. | 0.671 |
Y57G11C.6 | dhs-14 | Y57G11C.6.1 | R05D8.8.1 | Protein Tyrosine Phosphatase. | DeHydrogenases, Short chain. | 0.807 |
Y57G11C.6 | gska-3 | Y57G11C.6.1 | C36B1.10.1 | Protein Tyrosine Phosphatase. | Protein kinase domain-containing protein. | 0.887 |
col-12 | col-13 | F15H10.1.1 | F15H10.2.1 | Cuticle collagen 12; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen 13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.848 |
col-12 | col-146 | F15H10.1.1 | T06E4.6.1 | Cuticle collagen 12; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.876 |
col-12 | col-167 | F15H10.1.1 | T10E10.2.2 | Cuticle collagen 12; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.433 |
col-13 | col-12 | F15H10.2.1 | F15H10.1.1 | Cuticle collagen 13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen 12; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.848 |
col-13 | col-146 | F15H10.2.1 | T06E4.6.1 | Cuticle collagen 13; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.806 |
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